Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 AC243960.2-201ENST00000600996 747 ntBASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.04■□□□□ 0.32
SMARCC2Q8TAQ2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 MIR663B-201ENST00000408361 115 ntBASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 AL022328.3-201ENST00000607943 679 ntBASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 AC027601.3-201ENST00000622907 509 ntBASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMARCC2Q8TAQ2 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMARCC2Q8TAQ2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMARCC2Q8TAQ2 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC17.02■□□□□ 0.32
SMARCC2Q8TAQ2 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMARCC2Q8TAQ2 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMARCC2Q8TAQ2 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMARCC2Q8TAQ2 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.02■□□□□ 0.32
SMARCC2Q8TAQ2 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMARCC2Q8TAQ2 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMARCC2Q8TAQ2 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMARCC2Q8TAQ2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SMARCC2Q8TAQ2 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMARCC2Q8TAQ2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SMARCC2Q8TAQ2 AC010327.5-201ENST00000586923 3061 ntBASIC17.02■□□□□ 0.32
SMARCC2Q8TAQ2 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMARCC2Q8TAQ2 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.02■□□□□ 0.32
SMARCC2Q8TAQ2 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMARCC2Q8TAQ2 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms