Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 LRIT2-201ENST00000372113 3081 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 KRT18P40-201ENST00000599859 1571 ntBASIC8.69□□□□□ -1.02
SVIPQ8NHG7 AL359532.1-201ENST00000608729 1560 ntBASIC8.69□□□□□ -1.02
SVIPQ8NHG7 FBXO25-201ENST00000276326 2104 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 YIPF5-204ENST00000513112 2135 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 FOXP4-201ENST00000307972 3745 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 LINC01165-201ENST00000445190 1623 ntBASIC8.69□□□□□ -1.02
SVIPQ8NHG7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 NTNG2-201ENST00000372179 3984 ntTSL 5 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 LINC01343-201ENST00000431311 2283 ntTSL 3 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 AP001157.1-201ENST00000550837 2339 ntBASIC8.69□□□□□ -1.02
SVIPQ8NHG7 WDR36-203ENST00000506538 7048 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 TMEM174-201ENST00000296776 1759 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 CHN2-202ENST00000409041 2375 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 DYNC1I1-206ENST00000457059 2393 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 EIF4BP8-201ENST00000464704 1826 ntBASIC8.69□□□□□ -1.02
SVIPQ8NHG7 LDB3-203ENST00000372056 1868 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 PLAGL1-209ENST00000444202 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 AC003075.1-208ENST00000415246 596 ntTSL 3 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 AC009078.1-201ENST00000474978 783 ntBASIC8.69□□□□□ -1.02
SVIPQ8NHG7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 AC090630.1-201ENST00000550874 499 ntTSL 3 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 AC005954.1-201ENST00000591962 337 ntTSL 3 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 AC008753.2-201ENST00000597420 387 ntBASIC8.69□□□□□ -1.02
SVIPQ8NHG7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 ELOA-203ENST00000609199 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 CELF4-203ENST00000420428 4052 ntAPPRIS P3 TSL 5 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 AC019294.1-202ENST00000566174 2071 ntBASIC8.69□□□□□ -1.02
SVIPQ8NHG7 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 CBL-203ENST00000634586 3457 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 NSD3-202ENST00000317025 10776 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 TPK1-201ENST00000360057 2439 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 AC138907.1-201ENST00000570183 2405 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 SETD4-206ENST00000399212 3258 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC8.69□□□□□ -1.02
SVIPQ8NHG7 TRUB1-201ENST00000298746 3408 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 AP000708.1-201ENST00000527818 3423 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 KCNB2-201ENST00000523207 3582 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 IGSF1-203ENST00000370901 1820 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 RAD50-201ENST00000378823 8306 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 PRAMENP-202ENST00000419303 1869 ntTSL 2 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 HNRNPDL-201ENST00000295470 3781 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 ARHGAP42P5-201ENST00000548856 2936 ntBASIC8.68□□□□□ -1.02
SVIPQ8NHG7 NCLP1-201ENST00000445357 1963 ntBASIC8.68□□□□□ -1.02
SVIPQ8NHG7 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 AL049776.1-201ENST00000624600 2025 ntBASIC8.68□□□□□ -1.02
SVIPQ8NHG7 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 LINC02447-202ENST00000501888 2146 ntBASIC8.68□□□□□ -1.02
SVIPQ8NHG7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 PLCG2-207ENST00000564138 8707 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 MAPK10-316ENST00000641430 2285 ntBASIC8.68□□□□□ -1.02
SVIPQ8NHG7 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 GAL3ST4-203ENST00000413800 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 ATP2A1-202ENST00000395503 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 KCNK10-201ENST00000312350 2396 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 MELK-209ENST00000541717 2363 ntTSL 2 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 ZNF730-202ENST00000597761 2374 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 GOLGA3-207ENST00000545875 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 AL359237.1-203ENST00000554519 813 ntTSL 3 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 AL358335.1-201ENST00000555388 1066 ntBASIC8.68□□□□□ -1.02
SVIPQ8NHG7 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 BOLA2P2-202ENST00000604904 567 ntBASIC8.68□□□□□ -1.02
SVIPQ8NHG7 RBBP4P3-201ENST00000619705 1283 ntBASIC8.68□□□□□ -1.02
SVIPQ8NHG7 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 THBS3-203ENST00000457183 2727 ntTSL 2 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 AMPD3-208ENST00000528723 2753 ntTSL 2 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms