Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 AL137783.1-201ENST00000623494 1896 ntBASIC12.17□□□□□ -0.46
ZNF546Q86UE3 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 AL353705.2-201ENST00000428243 662 ntBASIC12.16□□□□□ -0.46
ZNF546Q86UE3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 AC106730.1-201ENST00000566722 1090 ntBASIC12.16□□□□□ -0.46
ZNF546Q86UE3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.16□□□□□ -0.46
ZNF546Q86UE3 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 AL355102.3-201ENST00000554299 1678 ntBASIC12.16□□□□□ -0.46
ZNF546Q86UE3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
ZNF546Q86UE3 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 PCDHB19P-202ENST00000625133 2914 ntBASIC12.15□□□□□ -0.46
ZNF546Q86UE3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms