Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SCXQ7RTU7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SCXQ7RTU7 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
SCXQ7RTU7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SCXQ7RTU7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
SCXQ7RTU7 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
SCXQ7RTU7 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SCXQ7RTU7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
SCXQ7RTU7 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SCXQ7RTU7 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SCXQ7RTU7 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
SCXQ7RTU7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC9.78□□□□□ -0.84
SCXQ7RTU7 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SCXQ7RTU7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC9.78□□□□□ -0.84
SCXQ7RTU7 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SCXQ7RTU7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SCXQ7RTU7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SCXQ7RTU7 AGAP7P-201ENST00000582299 2062 ntBASIC9.78□□□□□ -0.84
SCXQ7RTU7 AGAP14-201ENST00000624701 2060 ntBASIC9.78□□□□□ -0.84
SCXQ7RTU7 APP-205ENST00000358918 2366 ntTSL 5 BASIC9.78□□□□□ -0.84
SCXQ7RTU7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SCXQ7RTU7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SCXQ7RTU7 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
SCXQ7RTU7 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SCXQ7RTU7 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
SCXQ7RTU7 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SCXQ7RTU7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SCXQ7RTU7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SCXQ7RTU7 AC009090.5-201ENST00000624886 2285 ntBASIC9.77□□□□□ -0.84
SCXQ7RTU7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SCXQ7RTU7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
SCXQ7RTU7 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SCXQ7RTU7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.84
SCXQ7RTU7 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SCXQ7RTU7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SCXQ7RTU7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
SCXQ7RTU7 KRT8P44-201ENST00000441609 1350 ntBASIC9.77□□□□□ -0.84
SCXQ7RTU7 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SCXQ7RTU7 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
SCXQ7RTU7 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC9.77□□□□□ -0.84
SCXQ7RTU7 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SCXQ7RTU7 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 NME6-203ENST00000415644 849 ntTSL 2 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 FAM197Y7-201ENST00000432892 766 ntBASIC9.77□□□□□ -0.85
SCXQ7RTU7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 AC099548.2-209ENST00000480264 625 ntBASIC9.77□□□□□ -0.85
SCXQ7RTU7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 AC108725.1-201ENST00000495472 409 ntBASIC9.77□□□□□ -0.85
SCXQ7RTU7 GAPDHP40-201ENST00000505218 1006 ntBASIC9.77□□□□□ -0.85
SCXQ7RTU7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 AC023310.1-201ENST00000554836 735 ntBASIC9.77□□□□□ -0.85
SCXQ7RTU7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 RN7SL560P-201ENST00000577943 264 ntBASIC9.77□□□□□ -0.85
SCXQ7RTU7 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 AC243960.2-201ENST00000600996 747 ntBASIC9.77□□□□□ -0.85
SCXQ7RTU7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC9.77□□□□□ -0.85
SCXQ7RTU7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SCXQ7RTU7 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC9.77□□□□□ -0.85
SCXQ7RTU7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms