Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL10A1Q03692 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
COL10A1Q03692 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
COL10A1Q03692 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL10A1Q03692 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
COL10A1Q03692 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL10A1Q03692 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL10A1Q03692 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
COL10A1Q03692 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
COL10A1Q03692 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL10A1Q03692 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 AC136759.1-202ENST00000530858 2194 ntBASIC12.37□□□□□ -0.43
COL10A1Q03692 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.37□□□□□ -0.43
COL10A1Q03692 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
COL10A1Q03692 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.37□□□□□ -0.43
COL10A1Q03692 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.37□□□□□ -0.43
COL10A1Q03692 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.37□□□□□ -0.43
COL10A1Q03692 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
COL10A1Q03692 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.37□□□□□ -0.43
COL10A1Q03692 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
COL10A1Q03692 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 AC006001.1-201ENST00000325130 474 ntBASIC12.37□□□□□ -0.43
COL10A1Q03692 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
COL10A1Q03692 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
COL10A1Q03692 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
COL10A1Q03692 ARSEP1-201ENST00000420443 635 ntBASIC12.37□□□□□ -0.43
COL10A1Q03692 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.37□□□□□ -0.43
COL10A1Q03692 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.37□□□□□ -0.43
COL10A1Q03692 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.37□□□□□ -0.43
COL10A1Q03692 ATP5G2P4-201ENST00000442175 420 ntBASIC12.37□□□□□ -0.43
COL10A1Q03692 PUDPP3-201ENST00000445368 636 ntBASIC12.37□□□□□ -0.43
COL10A1Q03692 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
COL10A1Q03692 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.37□□□□□ -0.43
COL10A1Q03692 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.37□□□□□ -0.43
COL10A1Q03692 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.37□□□□□ -0.43
COL10A1Q03692 ALG3P1-201ENST00000508806 1114 ntBASIC12.37□□□□□ -0.43
COL10A1Q03692 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.37□□□□□ -0.43
COL10A1Q03692 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.37□□□□□ -0.43
COL10A1Q03692 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
COL10A1Q03692 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
COL10A1Q03692 AC103988.2-201ENST00000561804 725 ntBASIC12.37□□□□□ -0.43
COL10A1Q03692 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.37□□□□□ -0.43
COL10A1Q03692 MIR4683-201ENST00000579659 81 ntBASIC12.37□□□□□ -0.43
COL10A1Q03692 RN7SL713P-201ENST00000582127 302 ntBASIC12.37□□□□□ -0.43
COL10A1Q03692 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.37□□□□□ -0.43
COL10A1Q03692 AP001002.3-201ENST00000623482 206 ntBASIC12.37□□□□□ -0.43
COL10A1Q03692 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.37□□□□□ -0.43
COL10A1Q03692 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.37□□□□□ -0.43
COL10A1Q03692 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.37□□□□□ -0.43
COL10A1Q03692 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
COL10A1Q03692 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.37□□□□□ -0.43
COL10A1Q03692 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
COL10A1Q03692 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.37□□□□□ -0.43
COL10A1Q03692 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 AC152010.1-201ENST00000415779 2006 ntBASIC12.37□□□□□ -0.43
COL10A1Q03692 PDIA3P1-201ENST00000471856 1510 ntBASIC12.37□□□□□ -0.43
COL10A1Q03692 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL10A1Q03692 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL10A1Q03692 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
COL10A1Q03692 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
COL10A1Q03692 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
COL10A1Q03692 AC139712.1-201ENST00000378256 1875 ntBASIC12.36□□□□□ -0.43
COL10A1Q03692 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL10A1Q03692 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
COL10A1Q03692 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.36□□□□□ -0.43
COL10A1Q03692 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
COL10A1Q03692 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
COL10A1Q03692 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL10A1Q03692 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms