Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CDK5Q00535 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.16□□□□□ -0.3
CDK5Q00535 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.16□□□□□ -0.3
CDK5Q00535 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CDK5Q00535 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.16□□□□□ -0.3
CDK5Q00535 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.16□□□□□ -0.3
CDK5Q00535 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CDK5Q00535 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.16□□□□□ -0.3
CDK5Q00535 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.16□□□□□ -0.3
CDK5Q00535 DFFBP1-201ENST00000433250 979 ntBASIC13.16□□□□□ -0.3
CDK5Q00535 METTL21AP1-201ENST00000438852 635 ntBASIC13.16□□□□□ -0.3
CDK5Q00535 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.16□□□□□ -0.3
CDK5Q00535 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.16□□□□□ -0.3
CDK5Q00535 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.16□□□□□ -0.3
CDK5Q00535 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.16□□□□□ -0.3
CDK5Q00535 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.16□□□□□ -0.3
CDK5Q00535 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.16□□□□□ -0.3
CDK5Q00535 AC093512.1-201ENST00000617969 520 ntBASIC13.16□□□□□ -0.3
CDK5Q00535 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CDK5Q00535 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.16□□□□□ -0.3
CDK5Q00535 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.16□□□□□ -0.3
CDK5Q00535 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CDK5Q00535 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.16□□□□□ -0.3
CDK5Q00535 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CDK5Q00535 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.16□□□□□ -0.3
CDK5Q00535 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.16□□□□□ -0.3
CDK5Q00535 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.16□□□□□ -0.3
CDK5Q00535 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 AL928654.5-201ENST00000624831 2501 ntBASIC13.15□□□□□ -0.3
CDK5Q00535 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.15□□□□□ -0.3
CDK5Q00535 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.15□□□□□ -0.3
CDK5Q00535 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
CDK5Q00535 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CDK5Q00535 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
CDK5Q00535 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CDK5Q00535 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.15□□□□□ -0.3
CDK5Q00535 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
CDK5Q00535 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.15□□□□□ -0.3
CDK5Q00535 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.15□□□□□ -0.3
CDK5Q00535 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.15□□□□□ -0.3
CDK5Q00535 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.15□□□□□ -0.3
CDK5Q00535 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
CDK5Q00535 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.15□□□□□ -0.3
CDK5Q00535 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.15□□□□□ -0.3
CDK5Q00535 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.15□□□□□ -0.3
CDK5Q00535 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
CDK5Q00535 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.15□□□□□ -0.3
CDK5Q00535 AL391825.1-201ENST00000457671 1364 ntBASIC13.15□□□□□ -0.3
CDK5Q00535 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.15□□□□□ -0.3
CDK5Q00535 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CDK5Q00535 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
CDK5Q00535 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CDK5Q00535 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.15□□□□□ -0.3
CDK5Q00535 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDK5Q00535 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.15□□□□□ -0.3
CDK5Q00535 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms