Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.04■□□□□ 0.32
IRX3P78415 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX3P78415 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX3P78415 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX3P78415 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IRX3P78415 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX3P78415 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX3P78415 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.04■□□□□ 0.32
IRX3P78415 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX3P78415 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
IRX3P78415 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC17.03■□□□□ 0.32
IRX3P78415 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.03■□□□□ 0.32
IRX3P78415 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
IRX3P78415 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
IRX3P78415 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.03■□□□□ 0.32
IRX3P78415 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
IRX3P78415 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.03■□□□□ 0.32
IRX3P78415 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.03■□□□□ 0.32
IRX3P78415 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.03■□□□□ 0.32
IRX3P78415 AC079112.1-201ENST00000454972 939 ntBASIC17.03■□□□□ 0.32
IRX3P78415 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.03■□□□□ 0.32
IRX3P78415 PGAM1P5-201ENST00000548011 764 ntBASIC17.03■□□□□ 0.32
IRX3P78415 AL031713.1-201ENST00000564813 661 ntBASIC17.03■□□□□ 0.32
IRX3P78415 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.03■□□□□ 0.32
IRX3P78415 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.03■□□□□ 0.32
IRX3P78415 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.03■□□□□ 0.32
IRX3P78415 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.03■□□□□ 0.32
IRX3P78415 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 C18orf15-201ENST00000623680 2534 ntBASIC17.03■□□□□ 0.32
IRX3P78415 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.03■□□□□ 0.32
IRX3P78415 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.03■□□□□ 0.32
IRX3P78415 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX3P78415 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
IRX3P78415 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IRX3P78415 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
IRX3P78415 AC015909.3-201ENST00000572855 1794 ntBASIC17.02■□□□□ 0.32
IRX3P78415 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
IRX3P78415 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.02■□□□□ 0.32
IRX3P78415 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IRX3P78415 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IRX3P78415 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
IRX3P78415 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IRX3P78415 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IRX3P78415 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IRX3P78415 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
IRX3P78415 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IRX3P78415 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.02■□□□□ 0.32
IRX3P78415 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.02■□□□□ 0.32
IRX3P78415 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.02■□□□□ 0.32
IRX3P78415 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.02■□□□□ 0.32
IRX3P78415 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.02■□□□□ 0.32
IRX3P78415 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.02■□□□□ 0.32
IRX3P78415 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.02■□□□□ 0.32
IRX3P78415 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
IRX3P78415 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
IRX3P78415 RN7SL818P-201ENST00000485099 259 ntBASIC17.02■□□□□ 0.32
IRX3P78415 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.02■□□□□ 0.32
IRX3P78415 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC17.02■□□□□ 0.32
IRX3P78415 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IRX3P78415 RN7SL725P-201ENST00000606439 259 ntBASIC17.02■□□□□ 0.32
IRX3P78415 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IRX3P78415 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
IRX3P78415 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.02■□□□□ 0.32
IRX3P78415 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
IRX3P78415 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
IRX3P78415 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC17.02■□□□□ 0.31
IRX3P78415 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IRX3P78415 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.02■□□□□ 0.31
IRX3P78415 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.02■□□□□ 0.31
IRX3P78415 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IRX3P78415 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IRX3P78415 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms