Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 AC006277.1-201ENST00000624348 1610 ntBASIC12.19□□□□□ -0.46
RIPPLY3P57055 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 FAM86FP-201ENST00000338711 969 ntBASIC12.18□□□□□ -0.46
RIPPLY3P57055 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 AC106827.1-201ENST00000366454 431 ntBASIC12.18□□□□□ -0.46
RIPPLY3P57055 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 HLA-DMA-203ENST00000395305 777 ntBASIC12.18□□□□□ -0.46
RIPPLY3P57055 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 GAPDHP40-201ENST00000505218 1006 ntBASIC12.18□□□□□ -0.46
RIPPLY3P57055 AC113347.2-201ENST00000512350 279 ntBASIC12.18□□□□□ -0.46
RIPPLY3P57055 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 AP002490.2-201ENST00000524791 560 ntBASIC12.18□□□□□ -0.46
RIPPLY3P57055 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 AC007326.1-201ENST00000604539 458 ntBASIC12.18□□□□□ -0.46
RIPPLY3P57055 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC12.18□□□□□ -0.46
RIPPLY3P57055 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 AL691432.1-201ENST00000596308 1422 ntBASIC12.18□□□□□ -0.46
RIPPLY3P57055 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RIPPLY3P57055 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
RIPPLY3P57055 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.17□□□□□ -0.46
RIPPLY3P57055 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.17□□□□□ -0.46
RIPPLY3P57055 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
RIPPLY3P57055 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.17□□□□□ -0.46
RIPPLY3P57055 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RIPPLY3P57055 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RIPPLY3P57055 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RIPPLY3P57055 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RIPPLY3P57055 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms