Protein–RNA interactions for Protein: P50993

ATP1A2, Sodium/potassium-transporting ATPase subunit alpha-2, humanhuman

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A2P50993 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP1A2P50993 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATP1A2P50993 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ATP1A2P50993 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP1A2P50993 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATP1A2P50993 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP1A2P50993 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP1A2P50993 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP1A2P50993 AC104457.1-201ENST00000401024 814 ntBASIC15.31■□□□□ 0.04
ATP1A2P50993 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.31■□□□□ 0.04
ATP1A2P50993 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.31■□□□□ 0.04
ATP1A2P50993 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ATP1A2P50993 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.31■□□□□ 0.04
ATP1A2P50993 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ATP1A2P50993 ACA64.2-201ENST00000459014 129 ntBASIC15.31■□□□□ 0.04
ATP1A2P50993 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.31■□□□□ 0.04
ATP1A2P50993 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
ATP1A2P50993 AC106886.1-201ENST00000568660 600 ntBASIC15.31■□□□□ 0.04
ATP1A2P50993 AC132938.2-201ENST00000579188 680 ntBASIC15.31■□□□□ 0.04
ATP1A2P50993 SRD5A3P1-201ENST00000603021 949 ntBASIC15.31■□□□□ 0.04
ATP1A2P50993 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.31■□□□□ 0.04
ATP1A2P50993 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.31■□□□□ 0.04
ATP1A2P50993 AL591163.1-201ENST00000641757 987 ntBASIC15.31■□□□□ 0.04
ATP1A2P50993 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC15.31■□□□□ 0.04
ATP1A2P50993 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATP1A2P50993 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.31■□□□□ 0.04
ATP1A2P50993 AC018665.1-201ENST00000622927 1362 ntBASIC15.31■□□□□ 0.04
ATP1A2P50993 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC15.31■□□□□ 0.04
ATP1A2P50993 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATP1A2P50993 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP1A2P50993 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP1A2P50993 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATP1A2P50993 AL445209.1-201ENST00000607269 3491 ntBASIC15.31■□□□□ 0.04
ATP1A2P50993 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC15.31■□□□□ 0.04
ATP1A2P50993 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.31■□□□□ 0.04
ATP1A2P50993 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP1A2P50993 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP1A2P50993 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.31■□□□□ 0.04
ATP1A2P50993 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
ATP1A2P50993 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP1A2P50993 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATP1A2P50993 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP1A2P50993 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP1A2P50993 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
ATP1A2P50993 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC15.3■□□□□ 0.04
ATP1A2P50993 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
ATP1A2P50993 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.3■□□□□ 0.04
ATP1A2P50993 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
ATP1A2P50993 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP1A2P50993 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP1A2P50993 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.3■□□□□ 0.04
ATP1A2P50993 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP1A2P50993 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.3■□□□□ 0.04
ATP1A2P50993 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ATP1A2P50993 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.3■□□□□ 0.04
ATP1A2P50993 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 KRT17P8-201ENST00000540749 863 ntBASIC15.3■□□□□ 0.04
ATP1A2P50993 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC15.3■□□□□ 0.04
ATP1A2P50993 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP1A2P50993 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP1A2P50993 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
ATP1A2P50993 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP1A2P50993 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.3■□□□□ 0.04
ATP1A2P50993 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
ATP1A2P50993 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.3■□□□□ 0.04
ATP1A2P50993 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP1A2P50993 AC020910.6-201ENST00000623084 1459 ntBASIC15.3■□□□□ 0.04
ATP1A2P50993 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ATP1A2P50993 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ATP1A2P50993 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ATP1A2P50993 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP1A2P50993 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP1A2P50993 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.3■□□□□ 0.04
ATP1A2P50993 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP1A2P50993 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ATP1A2P50993 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
ATP1A2P50993 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP1A2P50993 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms