Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC9.34□□□□□ -0.91
UBE2AP49459 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC9.34□□□□□ -0.91
UBE2AP49459 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC9.34□□□□□ -0.91
UBE2AP49459 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC9.34□□□□□ -0.91
UBE2AP49459 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC9.34□□□□□ -0.91
UBE2AP49459 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC9.34□□□□□ -0.91
UBE2AP49459 SPDYE22P-201ENST00000582158 798 ntBASIC9.34□□□□□ -0.91
UBE2AP49459 BRI3BPP1-201ENST00000594224 787 ntBASIC9.34□□□□□ -0.91
UBE2AP49459 AL391069.4-201ENST00000609583 481 ntBASIC9.34□□□□□ -0.91
UBE2AP49459 METTL26-214ENST00000614890 801 ntTSL 3 BASIC9.34□□□□□ -0.91
UBE2AP49459 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
UBE2AP49459 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UBE2AP49459 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC9.34□□□□□ -0.91
UBE2AP49459 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UBE2AP49459 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UBE2AP49459 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
UBE2AP49459 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UBE2AP49459 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
UBE2AP49459 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC9.34□□□□□ -0.91
UBE2AP49459 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC9.34□□□□□ -0.91
UBE2AP49459 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
UBE2AP49459 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
UBE2AP49459 TDG-209ENST00000544861 1387 ntTSL 2 BASIC9.34□□□□□ -0.91
UBE2AP49459 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC9.34□□□□□ -0.91
UBE2AP49459 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
UBE2AP49459 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UBE2AP49459 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC9.34□□□□□ -0.91
UBE2AP49459 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
UBE2AP49459 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
UBE2AP49459 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
UBE2AP49459 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
UBE2AP49459 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
UBE2AP49459 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
UBE2AP49459 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
UBE2AP49459 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC9.34□□□□□ -0.91
UBE2AP49459 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
UBE2AP49459 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC9.34□□□□□ -0.91
UBE2AP49459 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
UBE2AP49459 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
UBE2AP49459 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC9.34□□□□□ -0.91
UBE2AP49459 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
UBE2AP49459 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
UBE2AP49459 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
UBE2AP49459 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
UBE2AP49459 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.92
UBE2AP49459 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC9.34□□□□□ -0.92
UBE2AP49459 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC9.33□□□□□ -0.92
UBE2AP49459 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC9.33□□□□□ -0.92
UBE2AP49459 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC9.33□□□□□ -0.92
UBE2AP49459 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC9.33□□□□□ -0.92
UBE2AP49459 KRT8P22-201ENST00000562317 1415 ntBASIC9.33□□□□□ -0.92
UBE2AP49459 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC9.33□□□□□ -0.92
UBE2AP49459 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC9.33□□□□□ -0.92
UBE2AP49459 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC9.33□□□□□ -0.92
UBE2AP49459 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC9.33□□□□□ -0.92
UBE2AP49459 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 AC055811.4-201ENST00000624039 1754 ntBASIC9.33□□□□□ -0.92
UBE2AP49459 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC9.33□□□□□ -0.92
UBE2AP49459 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC9.33□□□□□ -0.92
UBE2AP49459 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
UBE2AP49459 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC9.33□□□□□ -0.92
UBE2AP49459 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC9.33□□□□□ -0.92
UBE2AP49459 TMPRSS11CP-201ENST00000453277 683 ntBASIC9.33□□□□□ -0.92
UBE2AP49459 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
UBE2AP49459 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC9.33□□□□□ -0.92
UBE2AP49459 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC9.33□□□□□ -0.92
UBE2AP49459 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC9.33□□□□□ -0.92
UBE2AP49459 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC9.33□□□□□ -0.92
UBE2AP49459 AL359711.2-201ENST00000563105 872 ntBASIC9.33□□□□□ -0.92
UBE2AP49459 IFT20-206ENST00000578122 834 ntTSL 2 BASIC9.33□□□□□ -0.92
UBE2AP49459 IFT20-208ENST00000578985 831 ntTSL 3 BASIC9.33□□□□□ -0.92
UBE2AP49459 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
UBE2AP49459 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC9.33□□□□□ -0.92
UBE2AP49459 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC9.33□□□□□ -0.92
UBE2AP49459 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC9.33□□□□□ -0.92
UBE2AP49459 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
UBE2AP49459 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
UBE2AP49459 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UBE2AP49459 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms