Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
CXCL5P42830 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC9.91□□□□□ -0.82
CXCL5P42830 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 SALL4P5-201ENST00000419001 1760 ntBASIC9.91□□□□□ -0.82
CXCL5P42830 RN7SL832P-201ENST00000607781 1756 ntBASIC9.91□□□□□ -0.82
CXCL5P42830 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC9.91□□□□□ -0.82
CXCL5P42830 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC9.91□□□□□ -0.82
CXCL5P42830 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
CXCL5P42830 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC9.91□□□□□ -0.82
CXCL5P42830 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC9.91□□□□□ -0.82
CXCL5P42830 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC9.91□□□□□ -0.82
CXCL5P42830 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
CXCL5P42830 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
CXCL5P42830 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC9.91□□□□□ -0.82
CXCL5P42830 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC9.91□□□□□ -0.82
CXCL5P42830 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
CXCL5P42830 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC9.91□□□□□ -0.82
CXCL5P42830 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
CXCL5P42830 AL139094.1-201ENST00000405549 1188 ntBASIC9.91□□□□□ -0.82
CXCL5P42830 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC9.91□□□□□ -0.82
CXCL5P42830 SERF2-209ENST00000409646 559 ntTSL 4 BASIC9.91□□□□□ -0.82
CXCL5P42830 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC9.91□□□□□ -0.82
CXCL5P42830 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC9.91□□□□□ -0.82
CXCL5P42830 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 AC067863.1-201ENST00000494933 530 ntBASIC9.91□□□□□ -0.82
CXCL5P42830 AC026410.3-201ENST00000514280 936 ntBASIC9.91□□□□□ -0.82
CXCL5P42830 DUX4L47-201ENST00000566374 394 ntBASIC9.91□□□□□ -0.82
CXCL5P42830 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC9.91□□□□□ -0.82
CXCL5P42830 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC9.91□□□□□ -0.82
CXCL5P42830 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC9.91□□□□□ -0.82
CXCL5P42830 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
CXCL5P42830 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
CXCL5P42830 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC9.91□□□□□ -0.82
CXCL5P42830 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
CXCL5P42830 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC9.91□□□□□ -0.82
CXCL5P42830 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
CXCL5P42830 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC9.91□□□□□ -0.82
CXCL5P42830 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
CXCL5P42830 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
CXCL5P42830 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
CXCL5P42830 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CXCL5P42830 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CXCL5P42830 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CXCL5P42830 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC9.9□□□□□ -0.82
CXCL5P42830 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CXCL5P42830 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
CXCL5P42830 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CXCL5P42830 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC9.9□□□□□ -0.82
CXCL5P42830 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC9.9□□□□□ -0.82
CXCL5P42830 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
CXCL5P42830 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC9.9□□□□□ -0.82
CXCL5P42830 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
CXCL5P42830 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CXCL5P42830 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CXCL5P42830 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
CXCL5P42830 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
CXCL5P42830 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CXCL5P42830 AC011481.3-201ENST00000623895 5594 ntBASIC9.9□□□□□ -0.82
CXCL5P42830 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC9.9□□□□□ -0.82
CXCL5P42830 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC9.9□□□□□ -0.82
CXCL5P42830 MRPL37P1-201ENST00000592451 1337 ntBASIC9.9□□□□□ -0.82
CXCL5P42830 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
CXCL5P42830 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
CXCL5P42830 ADK-205ENST00000539909 1866 ntTSL 2 BASIC9.9□□□□□ -0.82
CXCL5P42830 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CXCL5P42830 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CXCL5P42830 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC9.9□□□□□ -0.82
CXCL5P42830 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC9.9□□□□□ -0.82
CXCL5P42830 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms