Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC17.68■□□□□ 0.42
TM4SF1P30408 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF1P30408 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.68■□□□□ 0.42
TM4SF1P30408 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TM4SF1P30408 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
TM4SF1P30408 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TM4SF1P30408 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC17.67■□□□□ 0.42
TM4SF1P30408 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 TCAF2P1-201ENST00000291129 2421 ntBASIC17.67■□□□□ 0.42
TM4SF1P30408 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC17.67■□□□□ 0.42
TM4SF1P30408 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.67■□□□□ 0.42
TM4SF1P30408 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.67■□□□□ 0.42
TM4SF1P30408 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TM4SF1P30408 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 GOLGA8UP-201ENST00000527159 1755 ntBASIC17.67■□□□□ 0.42
TM4SF1P30408 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TM4SF1P30408 AC106827.1-201ENST00000366454 431 ntBASIC17.67■□□□□ 0.42
TM4SF1P30408 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC17.67■□□□□ 0.42
TM4SF1P30408 NALT1-202ENST00000450304 437 ntTSL 3 BASIC17.67■□□□□ 0.42
TM4SF1P30408 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TM4SF1P30408 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC17.67■□□□□ 0.42
TM4SF1P30408 AC093300.1-201ENST00000510368 1201 ntBASIC17.67■□□□□ 0.42
TM4SF1P30408 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC17.67■□□□□ 0.42
TM4SF1P30408 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC17.67■□□□□ 0.42
TM4SF1P30408 AL590235.1-201ENST00000564650 861 ntBASIC17.67■□□□□ 0.42
TM4SF1P30408 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC17.67■□□□□ 0.42
TM4SF1P30408 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TM4SF1P30408 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 MIR6816-201ENST00000620368 66 ntBASIC17.67■□□□□ 0.42
TM4SF1P30408 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.67■□□□□ 0.42
TM4SF1P30408 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.67■□□□□ 0.42
TM4SF1P30408 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.67■□□□□ 0.42
TM4SF1P30408 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TM4SF1P30408 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF1P30408 AC232323.1-201ENST00000540724 2099 ntBASIC17.67■□□□□ 0.42
TM4SF1P30408 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.67■□□□□ 0.42
TM4SF1P30408 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF1P30408 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.66■□□□□ 0.42
TM4SF1P30408 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF1P30408 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.66■□□□□ 0.42
TM4SF1P30408 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC17.66■□□□□ 0.42
TM4SF1P30408 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF1P30408 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TM4SF1P30408 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF1P30408 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.66■□□□□ 0.42
TM4SF1P30408 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TM4SF1P30408 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF1P30408 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF1P30408 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF1P30408 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TM4SF1P30408 AC103592.1-201ENST00000394513 664 ntBASIC17.66■□□□□ 0.42
TM4SF1P30408 OR2W2P-201ENST00000406313 909 ntBASIC17.66■□□□□ 0.42
TM4SF1P30408 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC17.66■□□□□ 0.42
TM4SF1P30408 AC104961.1-201ENST00000427605 771 ntBASIC17.66■□□□□ 0.42
TM4SF1P30408 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC17.66■□□□□ 0.42
TM4SF1P30408 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TM4SF1P30408 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC17.66■□□□□ 0.42
TM4SF1P30408 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC17.66■□□□□ 0.42
TM4SF1P30408 MIR6074-201ENST00000612054 107 ntBASIC17.66■□□□□ 0.42
TM4SF1P30408 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC17.66■□□□□ 0.42
TM4SF1P30408 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC17.66■□□□□ 0.42
TM4SF1P30408 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC17.66■□□□□ 0.42
TM4SF1P30408 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC17.66■□□□□ 0.42
TM4SF1P30408 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.66■□□□□ 0.42
TM4SF1P30408 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.66■□□□□ 0.42
TM4SF1P30408 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF1P30408 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF1P30408 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF1P30408 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TM4SF1P30408 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF1P30408 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.66■□□□□ 0.42
TM4SF1P30408 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF1P30408 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF1P30408 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF1P30408 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TM4SF1P30408 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF1P30408 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF1P30408 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TM4SF1P30408 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF1P30408 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF1P30408 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TM4SF1P30408 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF1P30408 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF1P30408 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms