Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.45□□□□□ -0.26
ABCD3P28288 AC136759.1-202ENST00000530858 2194 ntBASIC13.45□□□□□ -0.26
ABCD3P28288 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
ABCD3P28288 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
ABCD3P28288 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ABCD3P28288 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.45□□□□□ -0.26
ABCD3P28288 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.45□□□□□ -0.26
ABCD3P28288 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.45□□□□□ -0.26
ABCD3P28288 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 AC090505.1-201ENST00000430515 1834 ntBASIC13.44□□□□□ -0.26
ABCD3P28288 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ABCD3P28288 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
ABCD3P28288 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
ABCD3P28288 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.44□□□□□ -0.26
ABCD3P28288 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.44□□□□□ -0.26
ABCD3P28288 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.44□□□□□ -0.26
ABCD3P28288 VDAC1P1-201ENST00000439229 848 ntBASIC13.44□□□□□ -0.26
ABCD3P28288 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.44□□□□□ -0.26
ABCD3P28288 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.44□□□□□ -0.26
ABCD3P28288 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.44□□□□□ -0.26
ABCD3P28288 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.44□□□□□ -0.26
ABCD3P28288 AC005740.2-201ENST00000511085 419 ntBASIC13.44□□□□□ -0.26
ABCD3P28288 SCARNA21-201ENST00000517026 139 ntBASIC13.44□□□□□ -0.26
ABCD3P28288 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.44□□□□□ -0.26
ABCD3P28288 AP001258.2-201ENST00000529891 490 ntBASIC13.44□□□□□ -0.26
ABCD3P28288 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.44□□□□□ -0.26
ABCD3P28288 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.44□□□□□ -0.26
ABCD3P28288 AC005586.2-201ENST00000563946 837 ntBASIC13.44□□□□□ -0.26
ABCD3P28288 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.44□□□□□ -0.26
ABCD3P28288 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
ABCD3P28288 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.44□□□□□ -0.26
ABCD3P28288 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.44□□□□□ -0.26
ABCD3P28288 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.44□□□□□ -0.26
ABCD3P28288 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
ABCD3P28288 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.44□□□□□ -0.26
ABCD3P28288 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCD3P28288 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 AC005252.3-201ENST00000623855 2258 ntBASIC13.43□□□□□ -0.26
ABCD3P28288 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.43□□□□□ -0.26
ABCD3P28288 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
ABCD3P28288 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.43□□□□□ -0.26
ABCD3P28288 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.43□□□□□ -0.26
ABCD3P28288 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
ABCD3P28288 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
ABCD3P28288 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.43□□□□□ -0.26
ABCD3P28288 DPM3-202ENST00000368399 517 ntBASIC13.43□□□□□ -0.26
ABCD3P28288 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.43□□□□□ -0.26
ABCD3P28288 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
ABCD3P28288 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.43□□□□□ -0.26
ABCD3P28288 AC104073.2-201ENST00000453737 312 ntBASIC13.43□□□□□ -0.26
ABCD3P28288 HLA-J-204ENST00000495278 958 ntBASIC13.43□□□□□ -0.26
ABCD3P28288 AC044849.1-201ENST00000519737 1188 ntBASIC13.43□□□□□ -0.26
ABCD3P28288 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.43□□□□□ -0.26
ABCD3P28288 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 MIR4525-201ENST00000580000 75 ntBASIC13.43□□□□□ -0.26
ABCD3P28288 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 CYP4F23P-201ENST00000593402 1579 ntBASIC13.43□□□□□ -0.26
ABCD3P28288 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
ABCD3P28288 AC090164.2-201ENST00000611487 516 ntBASIC13.43□□□□□ -0.26
ABCD3P28288 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
ABCD3P28288 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
ABCD3P28288 AL136295.7-201ENST00000619226 1200 ntBASIC13.43□□□□□ -0.26
ABCD3P28288 AC133540.1-201ENST00000620845 1019 ntBASIC13.43□□□□□ -0.26
ABCD3P28288 AC068587.8-201ENST00000641239 219 ntBASIC13.43□□□□□ -0.26
ABCD3P28288 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ABCD3P28288 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms