Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
VAMP1P23763 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.42□□□□□ -0.42
VAMP1P23763 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.42□□□□□ -0.42
VAMP1P23763 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.42□□□□□ -0.42
VAMP1P23763 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 AC072061.1-201ENST00000569710 2234 ntBASIC12.42□□□□□ -0.42
VAMP1P23763 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.42□□□□□ -0.42
VAMP1P23763 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.42□□□□□ -0.42
VAMP1P23763 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
VAMP1P23763 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.42□□□□□ -0.42
VAMP1P23763 AC215219.1-201ENST00000400706 1817 ntBASIC12.41□□□□□ -0.42
VAMP1P23763 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
VAMP1P23763 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.41□□□□□ -0.42
VAMP1P23763 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.41□□□□□ -0.42
VAMP1P23763 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.41□□□□□ -0.42
VAMP1P23763 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
VAMP1P23763 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
VAMP1P23763 AC004870.1-201ENST00000315132 882 ntBASIC12.41□□□□□ -0.42
VAMP1P23763 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
VAMP1P23763 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
VAMP1P23763 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.41□□□□□ -0.42
VAMP1P23763 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.41□□□□□ -0.42
VAMP1P23763 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
VAMP1P23763 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.41□□□□□ -0.42
VAMP1P23763 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.41□□□□□ -0.42
VAMP1P23763 ALG1L8P-201ENST00000533887 760 ntBASIC12.41□□□□□ -0.42
VAMP1P23763 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.41□□□□□ -0.42
VAMP1P23763 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 AL049829.3-201ENST00000604456 1875 ntBASIC12.41□□□□□ -0.42
VAMP1P23763 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC12.41□□□□□ -0.42
VAMP1P23763 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.41□□□□□ -0.42
VAMP1P23763 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.41□□□□□ -0.42
VAMP1P23763 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC12.41□□□□□ -0.42
VAMP1P23763 AC084121.4-201ENST00000641598 221 ntBASIC12.41□□□□□ -0.42
VAMP1P23763 AF228730.8-201ENST00000642140 221 ntBASIC12.41□□□□□ -0.42
VAMP1P23763 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
VAMP1P23763 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 DDX27-206ENST00000618172 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 AL157996.1-201ENST00000624684 2299 ntBASIC12.41□□□□□ -0.42
VAMP1P23763 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
VAMP1P23763 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.41□□□□□ -0.42
VAMP1P23763 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
VAMP1P23763 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.41□□□□□ -0.42
VAMP1P23763 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.41□□□□□ -0.42
VAMP1P23763 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC12.41□□□□□ -0.42
VAMP1P23763 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.41□□□□□ -0.42
VAMP1P23763 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VAMP1P23763 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VAMP1P23763 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.4□□□□□ -0.42
VAMP1P23763 CLK3P2-201ENST00000427566 1453 ntBASIC12.4□□□□□ -0.42
VAMP1P23763 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.4□□□□□ -0.42
VAMP1P23763 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
VAMP1P23763 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VAMP1P23763 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.4□□□□□ -0.42
VAMP1P23763 AC011498.7-201ENST00000624986 2027 ntBASIC12.4□□□□□ -0.42
VAMP1P23763 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.4□□□□□ -0.42
VAMP1P23763 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.4□□□□□ -0.42
VAMP1P23763 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VAMP1P23763 TCF4-232ENST00000566286 2119 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VAMP1P23763 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VAMP1P23763 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.4□□□□□ -0.42
VAMP1P23763 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VAMP1P23763 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
VAMP1P23763 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.4□□□□□ -0.42
VAMP1P23763 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.4□□□□□ -0.42
VAMP1P23763 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VAMP1P23763 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms