Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
BMP4P12644 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
BMP4P12644 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
BMP4P12644 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
BMP4P12644 AP002761.4-201ENST00000565433 3361 ntBASIC13.49□□□□□ -0.25
BMP4P12644 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.49□□□□□ -0.25
BMP4P12644 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 AL442647.2-201ENST00000429864 857 ntBASIC13.49□□□□□ -0.25
BMP4P12644 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.49□□□□□ -0.25
BMP4P12644 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.49□□□□□ -0.25
BMP4P12644 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.49□□□□□ -0.25
BMP4P12644 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.49□□□□□ -0.25
BMP4P12644 ELK1P1-201ENST00000485699 580 ntBASIC13.49□□□□□ -0.25
BMP4P12644 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.49□□□□□ -0.25
BMP4P12644 AC092552.1-201ENST00000547243 906 ntBASIC13.49□□□□□ -0.25
BMP4P12644 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.49□□□□□ -0.25
BMP4P12644 RAB43P1-201ENST00000561790 589 ntBASIC13.49□□□□□ -0.25
BMP4P12644 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.49□□□□□ -0.25
BMP4P12644 MIR3908-201ENST00000579798 126 ntBASIC13.49□□□□□ -0.25
BMP4P12644 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.49□□□□□ -0.25
BMP4P12644 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.49□□□□□ -0.25
BMP4P12644 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.49□□□□□ -0.25
BMP4P12644 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
BMP4P12644 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.49□□□□□ -0.25
BMP4P12644 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
BMP4P12644 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.49□□□□□ -0.25
BMP4P12644 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
BMP4P12644 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.49□□□□□ -0.25
BMP4P12644 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
BMP4P12644 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.48□□□□□ -0.25
BMP4P12644 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.48□□□□□ -0.25
BMP4P12644 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
BMP4P12644 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
BMP4P12644 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
BMP4P12644 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.48□□□□□ -0.25
BMP4P12644 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.48□□□□□ -0.25
BMP4P12644 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
BMP4P12644 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.48□□□□□ -0.25
BMP4P12644 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
BMP4P12644 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
BMP4P12644 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.48□□□□□ -0.25
BMP4P12644 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.48□□□□□ -0.25
BMP4P12644 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
BMP4P12644 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.48□□□□□ -0.25
BMP4P12644 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
BMP4P12644 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.48□□□□□ -0.25
BMP4P12644 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 BOLA2P3-201ENST00000404566 256 ntBASIC13.48□□□□□ -0.25
BMP4P12644 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.48□□□□□ -0.25
BMP4P12644 AC234783.1-201ENST00000441761 496 ntBASIC13.48□□□□□ -0.25
BMP4P12644 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.48□□□□□ -0.25
BMP4P12644 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 SLED1-202ENST00000512051 380 ntBASIC13.48□□□□□ -0.25
BMP4P12644 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 IGHV3-71-201ENST00000523324 359 ntBASIC13.48□□□□□ -0.25
BMP4P12644 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.48□□□□□ -0.25
BMP4P12644 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.48□□□□□ -0.25
BMP4P12644 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.48□□□□□ -0.25
BMP4P12644 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.48□□□□□ -0.25
BMP4P12644 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.48□□□□□ -0.25
BMP4P12644 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.48□□□□□ -0.25
BMP4P12644 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
BMP4P12644 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
BMP4P12644 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms