Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
TOP1P11387 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.13■□□□□ 0.33
TOP1P11387 AC005077.2-201ENST00000449786 690 ntBASIC17.13■□□□□ 0.33
TOP1P11387 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.13■□□□□ 0.33
TOP1P11387 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.13■□□□□ 0.33
TOP1P11387 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.13■□□□□ 0.33
TOP1P11387 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.13■□□□□ 0.33
TOP1P11387 AC009779.1-201ENST00000551138 283 ntBASIC17.13■□□□□ 0.33
TOP1P11387 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.13■□□□□ 0.33
TOP1P11387 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.13■□□□□ 0.33
TOP1P11387 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 AC026740.1-201ENST00000607068 791 ntBASIC17.13■□□□□ 0.33
TOP1P11387 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.13■□□□□ 0.33
TOP1P11387 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.13■□□□□ 0.33
TOP1P11387 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TOP1P11387 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.13■□□□□ 0.33
TOP1P11387 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
TOP1P11387 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.13■□□□□ 0.33
TOP1P11387 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
TOP1P11387 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TOP1P11387 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
TOP1P11387 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP1P11387 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TOP1P11387 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.12■□□□□ 0.33
TOP1P11387 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.12■□□□□ 0.33
TOP1P11387 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.12■□□□□ 0.33
TOP1P11387 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TOP1P11387 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TOP1P11387 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.12■□□□□ 0.33
TOP1P11387 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.12■□□□□ 0.33
TOP1P11387 CYP4F23P-201ENST00000593402 1579 ntBASIC17.12■□□□□ 0.33
TOP1P11387 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
TOP1P11387 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.12■□□□□ 0.33
TOP1P11387 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 AL008707.1-201ENST00000422498 534 ntBASIC17.12■□□□□ 0.33
TOP1P11387 AC011742.3-201ENST00000439053 820 ntBASIC17.12■□□□□ 0.33
TOP1P11387 AC125604.1-201ENST00000496255 707 ntBASIC17.12■□□□□ 0.33
TOP1P11387 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.12■□□□□ 0.33
TOP1P11387 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.12■□□□□ 0.33
TOP1P11387 AC133540.1-201ENST00000620845 1019 ntBASIC17.12■□□□□ 0.33
TOP1P11387 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.12■□□□□ 0.33
TOP1P11387 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.12■□□□□ 0.33
TOP1P11387 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
TOP1P11387 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.12■□□□□ 0.33
TOP1P11387 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TOP1P11387 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.12■□□□□ 0.33
TOP1P11387 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.12■□□□□ 0.33
TOP1P11387 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
TOP1P11387 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP1P11387 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOP1P11387 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.11■□□□□ 0.33
TOP1P11387 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TOP1P11387 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TOP1P11387 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.11■□□□□ 0.33
TOP1P11387 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOP1P11387 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOP1P11387 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.11■□□□□ 0.33
TOP1P11387 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOP1P11387 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOP1P11387 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TOP1P11387 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TOP1P11387 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms