Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 AC116165.1-201ENST00000611806 668 ntBASIC14.19□□□□□ -0.14
LINGO3P0C6S8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 AC008761.3-201ENST00000624803 892 ntBASIC14.19□□□□□ -0.14
LINGO3P0C6S8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 AC026992.2-203ENST00000563004 2419 ntBASIC14.19□□□□□ -0.14
LINGO3P0C6S8 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 POM121L14P-201ENST00000406100 1558 ntBASIC14.18□□□□□ -0.14
LINGO3P0C6S8 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 AC236430.1-201ENST00000402231 743 ntBASIC14.18□□□□□ -0.14
LINGO3P0C6S8 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 TPRX2P-201ENST00000535362 881 ntBASIC14.18□□□□□ -0.14
LINGO3P0C6S8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 RARRES2P5-201ENST00000564013 466 ntBASIC14.18□□□□□ -0.14
LINGO3P0C6S8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 AC000095.1-201ENST00000603208 874 ntBASIC14.18□□□□□ -0.14
LINGO3P0C6S8 AC025181.2-201ENST00000606994 802 ntBASIC14.18□□□□□ -0.14
LINGO3P0C6S8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 FAM90A11P-201ENST00000518378 2218 ntBASIC14.18□□□□□ -0.14
LINGO3P0C6S8 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 AC012617.1-204ENST00000586340 2305 ntBASIC14.18□□□□□ -0.14
LINGO3P0C6S8 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINGO3P0C6S8 AC138969.2-201ENST00000532739 9932 ntBASIC14.17□□□□□ -0.14
LINGO3P0C6S8 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms