Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC18.57■□□□□ 0.56
COL5A2P05997 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL5A2P05997 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL5A2P05997 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL5A2P05997 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.57■□□□□ 0.56
COL5A2P05997 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL5A2P05997 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC18.57■□□□□ 0.56
COL5A2P05997 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL5A2P05997 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.57■□□□□ 0.56
COL5A2P05997 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.57■□□□□ 0.56
COL5A2P05997 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL5A2P05997 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COL5A2P05997 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL5A2P05997 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL5A2P05997 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL5A2P05997 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL5A2P05997 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL5A2P05997 DKKL1P1-201ENST00000400550 698 ntBASIC18.57■□□□□ 0.56
COL5A2P05997 RPL10-203ENST00000406022 748 ntTSL 3 BASIC18.57■□□□□ 0.56
COL5A2P05997 AC133141.1-201ENST00000443015 339 ntBASIC18.57■□□□□ 0.56
COL5A2P05997 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL5A2P05997 KRT18P15-201ENST00000458108 1291 ntBASIC18.57■□□□□ 0.56
COL5A2P05997 VDAC1P11-201ENST00000458323 852 ntBASIC18.57■□□□□ 0.56
COL5A2P05997 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC18.57■□□□□ 0.56
COL5A2P05997 AC004801.1-201ENST00000549557 360 ntBASIC18.57■□□□□ 0.56
COL5A2P05997 PMEL-214ENST00000550447 901 ntTSL 3 BASIC18.57■□□□□ 0.56
COL5A2P05997 SRP14-208ENST00000560773 468 ntTSL 3 BASIC18.57■□□□□ 0.56
COL5A2P05997 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC18.57■□□□□ 0.56
COL5A2P05997 AC091304.3-201ENST00000566500 716 ntBASIC18.57■□□□□ 0.56
COL5A2P05997 AC110057.1-201ENST00000636031 898 ntBASIC18.57■□□□□ 0.56
COL5A2P05997 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL5A2P05997 PES1P2-201ENST00000449745 1735 ntBASIC18.57■□□□□ 0.56
COL5A2P05997 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL5A2P05997 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.57■□□□□ 0.56
COL5A2P05997 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.57■□□□□ 0.56
COL5A2P05997 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC18.57■□□□□ 0.56
COL5A2P05997 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A2P05997 GSN-209ENST00000449733 2702 ntTSL 2 BASIC18.56■□□□□ 0.56
COL5A2P05997 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A2P05997 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
COL5A2P05997 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A2P05997 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC18.56■□□□□ 0.56
COL5A2P05997 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A2P05997 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A2P05997 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.56■□□□□ 0.56
COL5A2P05997 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A2P05997 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC18.56■□□□□ 0.56
COL5A2P05997 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A2P05997 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A2P05997 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A2P05997 AC068760.1-201ENST00000493579 1953 ntBASIC18.56■□□□□ 0.56
COL5A2P05997 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.56■□□□□ 0.56
COL5A2P05997 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A2P05997 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC18.56■□□□□ 0.56
COL5A2P05997 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
COL5A2P05997 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
COL5A2P05997 GGTLC4P-201ENST00000402176 664 ntBASIC18.56■□□□□ 0.56
COL5A2P05997 RPSAP12-201ENST00000435879 888 ntBASIC18.56■□□□□ 0.56
COL5A2P05997 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC18.56■□□□□ 0.56
COL5A2P05997 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC18.56■□□□□ 0.56
COL5A2P05997 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC18.56■□□□□ 0.56
COL5A2P05997 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC18.56■□□□□ 0.56
COL5A2P05997 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC18.56■□□□□ 0.56
COL5A2P05997 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC18.56■□□□□ 0.56
COL5A2P05997 AC080013.5-201ENST00000607044 679 ntBASIC18.56■□□□□ 0.56
COL5A2P05997 PHF23-213ENST00000613632 850 ntTSL 5 BASIC18.56■□□□□ 0.56
COL5A2P05997 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.56■□□□□ 0.56
COL5A2P05997 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
COL5A2P05997 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A2P05997 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A2P05997 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A2P05997 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COL5A2P05997 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A2P05997 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A2P05997 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A2P05997 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
COL5A2P05997 AC013268.4-201ENST00000637413 2228 ntBASIC18.56■□□□□ 0.56
COL5A2P05997 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A2P05997 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A2P05997 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A2P05997 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A2P05997 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.55■□□□□ 0.56
COL5A2P05997 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.55■□□□□ 0.56
COL5A2P05997 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A2P05997 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A2P05997 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A2P05997 AL139158.3-201ENST00000641212 1562 ntBASIC18.55■□□□□ 0.56
COL5A2P05997 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A2P05997 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC18.55■□□□□ 0.56
COL5A2P05997 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC18.55■□□□□ 0.56
COL5A2P05997 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A2P05997 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC18.55■□□□□ 0.56
COL5A2P05997 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A2P05997 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC18.55■□□□□ 0.56
COL5A2P05997 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COL5A2P05997 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A2P05997 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC18.55■□□□□ 0.56
COL5A2P05997 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A2P05997 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
COL5A2P05997 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms