Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.64■□□□□ 0.09
HLA-DRAP01903 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
HLA-DRAP01903 AL008638.5-201ENST00000623814 1298 ntBASIC15.64■□□□□ 0.09
HLA-DRAP01903 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRAP01903 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRAP01903 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRAP01903 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.64■□□□□ 0.09
HLA-DRAP01903 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.64■□□□□ 0.09
HLA-DRAP01903 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRAP01903 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRAP01903 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DRAP01903 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.64■□□□□ 0.09
HLA-DRAP01903 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
HLA-DRAP01903 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
HLA-DRAP01903 FAM90A7P-201ENST00000382628 1395 ntBASIC15.63■□□□□ 0.09
HLA-DRAP01903 FAM90A23P-201ENST00000400136 1395 ntBASIC15.63■□□□□ 0.09
HLA-DRAP01903 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRAP01903 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
HLA-DRAP01903 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DRAP01903 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.63■□□□□ 0.09
HLA-DRAP01903 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRAP01903 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRAP01903 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HLA-DRAP01903 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRAP01903 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DRAP01903 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.63■□□□□ 0.09
HLA-DRAP01903 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRAP01903 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRAP01903 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRAP01903 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRAP01903 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HLA-DRAP01903 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRAP01903 KRT18P36-201ENST00000411618 1276 ntBASIC15.63■□□□□ 0.09
HLA-DRAP01903 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.63■□□□□ 0.09
HLA-DRAP01903 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HLA-DRAP01903 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
HLA-DRAP01903 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.63■□□□□ 0.09
HLA-DRAP01903 AC003686.1-201ENST00000550956 1034 ntBASIC15.63■□□□□ 0.09
HLA-DRAP01903 RN7SL219P-201ENST00000582872 296 ntBASIC15.63■□□□□ 0.09
HLA-DRAP01903 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRAP01903 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRAP01903 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.63■□□□□ 0.09
HLA-DRAP01903 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DRAP01903 AC068587.8-201ENST00000641239 219 ntBASIC15.63■□□□□ 0.09
HLA-DRAP01903 AC004923.1-202ENST00000642106 209 ntBASIC15.63■□□□□ 0.09
HLA-DRAP01903 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRAP01903 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRAP01903 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.63■□□□□ 0.09
HLA-DRAP01903 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.63■□□□□ 0.09
HLA-DRAP01903 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRAP01903 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRAP01903 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.63■□□□□ 0.09
HLA-DRAP01903 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRAP01903 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DRAP01903 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DRAP01903 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRAP01903 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRAP01903 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRAP01903 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRAP01903 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRAP01903 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRAP01903 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRAP01903 AC007274.1-201ENST00000439805 662 ntBASIC15.62■□□□□ 0.09
HLA-DRAP01903 AC104073.2-201ENST00000453737 312 ntBASIC15.62■□□□□ 0.09
HLA-DRAP01903 PFN1P12-201ENST00000455938 534 ntBASIC15.62■□□□□ 0.09
HLA-DRAP01903 SERPINA13P-202ENST00000478994 924 ntBASIC15.62■□□□□ 0.09
HLA-DRAP01903 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 AC124068.2-201ENST00000569473 1109 ntBASIC15.62■□□□□ 0.09
HLA-DRAP01903 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRAP01903 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 AP000346.4-201ENST00000614827 381 ntBASIC15.62■□□□□ 0.09
HLA-DRAP01903 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRAP01903 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DRAP01903 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRAP01903 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRAP01903 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRAP01903 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRAP01903 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRAP01903 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRAP01903 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DRAP01903 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms