Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.12■□□□□ 0.01
LRCH4O75427 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.12■□□□□ 0.01
LRCH4O75427 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LRCH4O75427 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.12■□□□□ 0.01
LRCH4O75427 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LRCH4O75427 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.12■□□□□ 0.01
LRCH4O75427 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LRCH4O75427 KRT223P-202ENST00000449164 1292 ntBASIC15.12■□□□□ 0.01
LRCH4O75427 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.12■□□□□ 0.01
LRCH4O75427 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.12■□□□□ 0.01
LRCH4O75427 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.12■□□□□ 0.01
LRCH4O75427 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.12■□□□□ 0.01
LRCH4O75427 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 AC100827.2-201ENST00000563214 1194 ntBASIC15.12■□□□□ 0.01
LRCH4O75427 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.12■□□□□ 0.01
LRCH4O75427 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LRCH4O75427 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH4O75427 AC015818.8-201ENST00000587907 1519 ntBASIC15.12■□□□□ 0.01
LRCH4O75427 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.12■□□□□ 0.01
LRCH4O75427 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LRCH4O75427 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LRCH4O75427 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
LRCH4O75427 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.11■□□□□ 0.01
LRCH4O75427 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 AC023794.5-201ENST00000564380 2157 ntBASIC15.11■□□□□ 0.01
LRCH4O75427 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LRCH4O75427 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LRCH4O75427 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.11■□□□□ 0.01
LRCH4O75427 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.11■□□□□ 0.01
LRCH4O75427 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
LRCH4O75427 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.11■□□□□ 0.01
LRCH4O75427 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LRCH4O75427 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LRCH4O75427 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LRCH4O75427 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
LRCH4O75427 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.11■□□□□ 0.01
LRCH4O75427 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LRCH4O75427 FAM58BP-201ENST00000439056 645 ntBASIC15.11■□□□□ 0.01
LRCH4O75427 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.11■□□□□ 0.01
LRCH4O75427 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.11■□□□□ 0.01
LRCH4O75427 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.11■□□□□ 0.01
LRCH4O75427 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 AC005962.1-201ENST00000584100 773 ntBASIC15.11■□□□□ 0.01
LRCH4O75427 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.11■□□□□ 0.01
LRCH4O75427 AC017083.2-201ENST00000608069 979 ntBASIC15.11■□□□□ 0.01
LRCH4O75427 AC009542.2-202ENST00000619004 1067 ntBASIC15.11■□□□□ 0.01
LRCH4O75427 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.11■□□□□ 0.01
LRCH4O75427 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LRCH4O75427 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.11■□□□□ 0.01
LRCH4O75427 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.11■□□□□ 0.01
LRCH4O75427 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
LRCH4O75427 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.11■□□□□ 0.01
LRCH4O75427 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.11■□□□□ 0.01
LRCH4O75427 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.11■□□□□ 0.01
LRCH4O75427 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LRCH4O75427 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 AC097376.2-205ENST00000610159 5334 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms