Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.74□□□□□ -0.37
XRCC2O43543 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.74□□□□□ -0.37
XRCC2O43543 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.74□□□□□ -0.37
XRCC2O43543 AC131212.3-201ENST00000624087 4219 ntBASIC12.74□□□□□ -0.37
XRCC2O43543 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
XRCC2O43543 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 AC009093.2-202ENST00000620513 2079 ntBASIC12.74□□□□□ -0.37
XRCC2O43543 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
XRCC2O43543 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.74□□□□□ -0.37
XRCC2O43543 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.74□□□□□ -0.37
XRCC2O43543 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
XRCC2O43543 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.74□□□□□ -0.37
XRCC2O43543 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.73□□□□□ -0.37
XRCC2O43543 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 DMBT1P1-203ENST00000636837 4628 ntBASIC12.73□□□□□ -0.37
XRCC2O43543 TCAM1P-207ENST00000485295 1537 ntBASIC12.73□□□□□ -0.37
XRCC2O43543 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
XRCC2O43543 AC009093.10-201ENST00000641956 1442 ntBASIC12.73□□□□□ -0.37
XRCC2O43543 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
XRCC2O43543 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
XRCC2O43543 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
XRCC2O43543 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.73□□□□□ -0.37
XRCC2O43543 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
XRCC2O43543 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
XRCC2O43543 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.73□□□□□ -0.37
XRCC2O43543 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
XRCC2O43543 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
XRCC2O43543 NME2P1-201ENST00000426182 414 ntBASIC12.73□□□□□ -0.37
XRCC2O43543 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
XRCC2O43543 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
XRCC2O43543 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.73□□□□□ -0.37
XRCC2O43543 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.73□□□□□ -0.37
XRCC2O43543 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.73□□□□□ -0.37
XRCC2O43543 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.73□□□□□ -0.37
XRCC2O43543 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.73□□□□□ -0.37
XRCC2O43543 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.73□□□□□ -0.37
XRCC2O43543 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
XRCC2O43543 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 ZACNP1-201ENST00000612259 710 ntBASIC12.73□□□□□ -0.37
XRCC2O43543 AC244669.2-201ENST00000612320 853 ntBASIC12.73□□□□□ -0.37
XRCC2O43543 RHOXF1P1-202ENST00000635473 501 ntBASIC12.73□□□□□ -0.37
XRCC2O43543 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.73□□□□□ -0.37
XRCC2O43543 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
XRCC2O43543 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
XRCC2O43543 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.73□□□□□ -0.37
XRCC2O43543 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
XRCC2O43543 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
XRCC2O43543 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
XRCC2O43543 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
XRCC2O43543 AL031595.1-201ENST00000623969 4709 ntBASIC12.73□□□□□ -0.37
XRCC2O43543 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
XRCC2O43543 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.72□□□□□ -0.37
XRCC2O43543 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
XRCC2O43543 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.72□□□□□ -0.37
XRCC2O43543 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
XRCC2O43543 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
XRCC2O43543 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.72□□□□□ -0.37
XRCC2O43543 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
XRCC2O43543 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.72□□□□□ -0.37
XRCC2O43543 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms