Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 DANCR-204ENST00000444958 709 ntTSL 3 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 AC009533.2-201ENST00000543664 586 ntBASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 REXO1L10P-201ENST00000615707 1290 ntBASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 REXO1L12P-201ENST00000622156 912 ntBASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 SCN3B-206ENST00000530277 3984 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 KHSRPP1-201ENST00000427983 1768 ntBASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 POLL-201ENST00000299206 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 ARHGAP36-203ENST00000370922 2736 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 AP2A1-201ENST00000354293 3388 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 EPHB6-201ENST00000411471 3367 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 AC016397.2-201ENST00000624848 1985 ntBASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 COPA-202ENST00000368069 4664 ntTSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 MED24-201ENST00000356271 3446 ntTSL 2 BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 PFKM-202ENST00000340802 3176 ntTSL 2 BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 ADGRG5-202ENST00000349457 3557 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 LINC00668-204ENST00000580197 2343 ntTSL 2 BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 WWC2-209ENST00000513834 4887 ntTSL 5 BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 SYT10-201ENST00000228567 4461 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 SLCO2A1-201ENST00000310926 4223 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 UNC93B2-201ENST00000285383 730 ntBASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 AL359075.1-203ENST00000462729 1002 ntBASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 AC022447.6-201ENST00000515522 438 ntBASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 RNA5SP413-201ENST00000516373 109 ntBASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 AC011840.4-201ENST00000578471 627 ntBASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 METTL23-204ENST00000586752 904 ntTSL 2 BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 AL138831.2-201ENST00000606564 490 ntBASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 SPEG-225ENST00000617028 815 ntTSL 5 BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 FAM197Y4-202ENST00000622692 608 ntBASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC8□□□□□ -1.13
CHKB-CPT1BH3BT56 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms