Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC211476.1-201ENST00000503899 468 ntBASIC12.71□□□□□ -0.37
SHISA3A0PJX4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 RARRES2P5-201ENST00000564013 466 ntBASIC12.71□□□□□ -0.37
SHISA3A0PJX4 AC009407.1-201ENST00000568958 598 ntBASIC12.71□□□□□ -0.37
SHISA3A0PJX4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 AC104506.1-201ENST00000609247 429 ntBASIC12.71□□□□□ -0.37
SHISA3A0PJX4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 AC007431.3-201ENST00000623221 587 ntBASIC12.71□□□□□ -0.37
SHISA3A0PJX4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SHISA3A0PJX4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SHISA3A0PJX4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SHISA3A0PJX4 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
SHISA3A0PJX4 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.71□□□□□ -0.38
SHISA3A0PJX4 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.71□□□□□ -0.38
SHISA3A0PJX4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SHISA3A0PJX4 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.71□□□□□ -0.38
SHISA3A0PJX4 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SHISA3A0PJX4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SHISA3A0PJX4 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.71□□□□□ -0.38
SHISA3A0PJX4 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
SHISA3A0PJX4 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 DLX4-206ENST00000611342 1662 ntBASIC12.7□□□□□ -0.38
SHISA3A0PJX4 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 AC009474.1-201ENST00000455096 1565 ntBASIC12.7□□□□□ -0.38
SHISA3A0PJX4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 AC026271.4-201ENST00000578214 1833 ntBASIC12.7□□□□□ -0.38
SHISA3A0PJX4 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 AC114812.1-204ENST00000449669 728 ntBASIC12.7□□□□□ -0.38
SHISA3A0PJX4 AC009477.1-201ENST00000452936 217 ntBASIC12.7□□□□□ -0.38
SHISA3A0PJX4 AP001582.1-201ENST00000525856 295 ntBASIC12.7□□□□□ -0.38
SHISA3A0PJX4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 BRI3BPP1-201ENST00000594224 787 ntBASIC12.7□□□□□ -0.38
SHISA3A0PJX4 AC027612.4-201ENST00000605371 583 ntBASIC12.7□□□□□ -0.38
SHISA3A0PJX4 AC138696.2-201ENST00000607376 223 ntBASIC12.7□□□□□ -0.38
SHISA3A0PJX4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms