Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 AC138466.5-201ENST00000624002 808 ntBASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 KHSRPP1-201ENST00000427983 1768 ntBASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 AREG-202ENST00000502307 956 ntTSL 5 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.74□□□□□ -0.21
CCDC187A0A096LP49 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 RN7SKP109-201ENST00000410592 316 ntBASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 BCAS2P2-201ENST00000425064 674 ntBASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms