Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTCH2Q9Y6C5 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCH2Q9Y6C5 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.19■□□□□ 0.18
PTCH2Q9Y6C5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTCH2Q9Y6C5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PTCH2Q9Y6C5 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC16.19■□□□□ 0.18
PTCH2Q9Y6C5 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.19■□□□□ 0.18
PTCH2Q9Y6C5 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PTCH2Q9Y6C5 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
PTCH2Q9Y6C5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 PGAM1P11-201ENST00000416729 680 ntBASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 AL080243.1-201ENST00000423293 1060 ntBASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 GALP-202ENST00000440823 889 ntTSL 5 BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 AC022532.1-201ENST00000624563 1728 ntBASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 AC019109.1-201ENST00000401725 1874 ntBASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 LINC01101-201ENST00000622953 1884 ntBASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTCH2Q9Y6C5 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 CDCA4P4-201ENST00000435216 680 ntBASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 GOLGA6L16P-201ENST00000441780 1299 ntBASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 EEF1GP8-201ENST00000506566 1154 ntBASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 KLF17P1-201ENST00000547105 1126 ntBASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 PHF23-213ENST00000613632 850 ntTSL 5 BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 AL365181.1-201ENST00000564032 1828 ntBASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTCH2Q9Y6C5 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms