Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 BX842568.4-201ENST00000421222 227 ntBASIC14.24□□□□□ -0.13
EBF4Q9BQW3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 AL390955.2-201ENST00000603032 514 ntBASIC14.24□□□□□ -0.13
EBF4Q9BQW3 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 LRRC59-203ENST00000576448 1531 ntBASIC14.24□□□□□ -0.13
EBF4Q9BQW3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EBF4Q9BQW3 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 AC241585.1-201ENST00000433527 519 ntBASIC14.23□□□□□ -0.13
EBF4Q9BQW3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 SNHG9-202ENST00000564014 471 ntBASIC14.23□□□□□ -0.13
EBF4Q9BQW3 AC104794.3-201ENST00000566840 1248 ntBASIC14.23□□□□□ -0.13
EBF4Q9BQW3 AC015911.4-201ENST00000588022 1070 ntBASIC14.23□□□□□ -0.13
EBF4Q9BQW3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
EBF4Q9BQW3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms