Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 AC007967.2-201ENST00000432613 625 ntBASIC13.79□□□□□ -0.2
NR1H4Q96RI1 TPM4P1-201ENST00000436100 807 ntBASIC13.79□□□□□ -0.2
NR1H4Q96RI1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 SLC25A6P4-201ENST00000586535 553 ntBASIC13.79□□□□□ -0.2
NR1H4Q96RI1 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 PCDHA6-201ENST00000378126 3267 ntBASIC13.79□□□□□ -0.2
NR1H4Q96RI1 HLA-A-201ENST00000376802 1334 ntBASIC13.79□□□□□ -0.2
NR1H4Q96RI1 TUBB8P4-201ENST00000511806 1324 ntBASIC13.79□□□□□ -0.2
NR1H4Q96RI1 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 AL021155.1-201ENST00000438808 2637 ntBASIC13.78□□□□□ -0.2
NR1H4Q96RI1 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 AP003969.2-201ENST00000623739 2275 ntBASIC13.78□□□□□ -0.2
NR1H4Q96RI1 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 AC064836.3-201ENST00000607928 673 ntBASIC13.78□□□□□ -0.2
NR1H4Q96RI1 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 AL445250.1-201ENST00000641671 2259 ntBASIC13.78□□□□□ -0.2
NR1H4Q96RI1 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NR1H4Q96RI1 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC13.77□□□□□ -0.2
NR1H4Q96RI1 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC13.77□□□□□ -0.2
NR1H4Q96RI1 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
NR1H4Q96RI1 DDX12P-201ENST00000432996 2947 ntBASIC13.77□□□□□ -0.2
NR1H4Q96RI1 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NR1H4Q96RI1 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
NR1H4Q96RI1 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
NR1H4Q96RI1 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 AC102953.2-201ENST00000609755 3026 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms