Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 AC011481.3-201ENST00000623895 5594 ntBASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 SPCS2P4-201ENST00000436160 681 ntBASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 KRT8P23-201ENST00000560090 1207 ntBASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 HCG4P8-203ENST00000443049 980 ntBASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 AC079776.4-201ENST00000511039 504 ntBASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 BANF1P1-201ENST00000553684 263 ntBASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 AC243562.1-201ENST00000560672 389 ntBASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 AC034105.1-201ENST00000563488 319 ntBASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 LINC01225-203ENST00000563550 1244 ntBASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 AL355102.3-201ENST00000554299 1678 ntBASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 AC022497.1-201ENST00000624916 3691 ntBASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms