Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
BEST4Q8NFU0 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.69□□□□□ -0.38
BEST4Q8NFU0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BEST4Q8NFU0 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BEST4Q8NFU0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BEST4Q8NFU0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BEST4Q8NFU0 CICP1-201ENST00000416803 2410 ntBASIC12.69□□□□□ -0.38
BEST4Q8NFU0 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
BEST4Q8NFU0 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BEST4Q8NFU0 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
BEST4Q8NFU0 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BEST4Q8NFU0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.69□□□□□ -0.38
BEST4Q8NFU0 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BEST4Q8NFU0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
BEST4Q8NFU0 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 RN7SL618P-201ENST00000477850 296 ntBASIC12.68□□□□□ -0.38
BEST4Q8NFU0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 AP000344.2-201ENST00000512987 629 ntBASIC12.68□□□□□ -0.38
BEST4Q8NFU0 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 KRT18P58-201ENST00000527480 1120 ntBASIC12.68□□□□□ -0.38
BEST4Q8NFU0 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 AC004835.2-201ENST00000603762 682 ntBASIC12.68□□□□□ -0.38
BEST4Q8NFU0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 AL157996.1-201ENST00000624684 2299 ntBASIC12.68□□□□□ -0.38
BEST4Q8NFU0 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
BEST4Q8NFU0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 LINC00567-201ENST00000569854 3409 ntBASIC12.67□□□□□ -0.38
BEST4Q8NFU0 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 AL645937.6-201ENST00000641122 3727 ntBASIC12.67□□□□□ -0.38
BEST4Q8NFU0 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 RN7SL832P-201ENST00000607781 1756 ntBASIC12.67□□□□□ -0.38
BEST4Q8NFU0 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms