Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLX4Q8IY92 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLX4Q8IY92 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLX4Q8IY92 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLX4Q8IY92 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLX4Q8IY92 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLX4Q8IY92 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLX4Q8IY92 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLX4Q8IY92 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 U3.5-201ENST00000363448 216 ntBASIC17.21■□□□□ 0.35
SLX4Q8IY92 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 CD81-209ENST00000492627 886 ntTSL 3 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 TBC1D3P6-201ENST00000505954 962 ntBASIC17.21■□□□□ 0.35
SLX4Q8IY92 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 BAK1P2-201ENST00000532665 631 ntBASIC17.21■□□□□ 0.35
SLX4Q8IY92 PMEL-214ENST00000550447 901 ntTSL 3 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 BX322534.1-201ENST00000635574 241 ntBASIC17.21■□□□□ 0.35
SLX4Q8IY92 AC215524.1-201ENST00000635696 241 ntBASIC17.21■□□□□ 0.35
SLX4Q8IY92 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.21■□□□□ 0.35
SLX4Q8IY92 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
SLX4Q8IY92 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SLX4Q8IY92 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SLX4Q8IY92 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLX4Q8IY92 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLX4Q8IY92 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SLX4Q8IY92 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLX4Q8IY92 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLX4Q8IY92 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SLX4Q8IY92 SHMT1P1-201ENST00000419974 1312 ntBASIC17.2■□□□□ 0.34
SLX4Q8IY92 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLX4Q8IY92 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLX4Q8IY92 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLX4Q8IY92 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLX4Q8IY92 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLX4Q8IY92 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.2■□□□□ 0.34
SLX4Q8IY92 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLX4Q8IY92 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLX4Q8IY92 GULOP-201ENST00000454030 748 ntBASIC17.2■□□□□ 0.34
SLX4Q8IY92 GPX3-202ENST00000517973 612 ntTSL 3 BASIC17.2■□□□□ 0.34
SLX4Q8IY92 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC17.2■□□□□ 0.34
SLX4Q8IY92 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLX4Q8IY92 AC113385.2-201ENST00000614465 762 ntBASIC17.2■□□□□ 0.34
SLX4Q8IY92 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC17.2■□□□□ 0.34
SLX4Q8IY92 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.2■□□□□ 0.34
SLX4Q8IY92 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLX4Q8IY92 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.2■□□□□ 0.34
SLX4Q8IY92 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLX4Q8IY92 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SLX4Q8IY92 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLX4Q8IY92 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLX4Q8IY92 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLX4Q8IY92 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLX4Q8IY92 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC17.2■□□□□ 0.34
SLX4Q8IY92 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLX4Q8IY92 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLX4Q8IY92 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SLX4Q8IY92 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLX4Q8IY92 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLX4Q8IY92 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SLX4Q8IY92 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC17.19■□□□□ 0.34
SLX4Q8IY92 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLX4Q8IY92 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLX4Q8IY92 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC17.19■□□□□ 0.34
SLX4Q8IY92 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC17.19■□□□□ 0.34
SLX4Q8IY92 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLX4Q8IY92 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SLX4Q8IY92 FDPSP7-201ENST00000429043 1054 ntBASIC17.19■□□□□ 0.34
SLX4Q8IY92 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC17.19■□□□□ 0.34
SLX4Q8IY92 KRT8P30-201ENST00000432100 650 ntBASIC17.19■□□□□ 0.34
SLX4Q8IY92 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC17.19■□□□□ 0.34
SLX4Q8IY92 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC17.19■□□□□ 0.34
SLX4Q8IY92 AC080013.5-201ENST00000607044 679 ntBASIC17.19■□□□□ 0.34
SLX4Q8IY92 AC233280.19-201ENST00000633223 136 ntBASIC17.19■□□□□ 0.34
SLX4Q8IY92 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC17.19■□□□□ 0.34
SLX4Q8IY92 RPL13AP3-202ENST00000494676 1473 ntBASIC17.19■□□□□ 0.34
SLX4Q8IY92 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLX4Q8IY92 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLX4Q8IY92 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLX4Q8IY92 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLX4Q8IY92 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.19■□□□□ 0.34
SLX4Q8IY92 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
SLX4Q8IY92 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLX4Q8IY92 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SLX4Q8IY92 AC068760.1-201ENST00000493579 1953 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms