Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 AC026320.2-201ENST00000434379 478 ntBASIC16.23■□□□□ 0.19
TRIM50Q86XT4 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 AC017007.3-201ENST00000479865 435 ntBASIC16.23■□□□□ 0.19
TRIM50Q86XT4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 U62317.3-201ENST00000608319 855 ntBASIC16.23■□□□□ 0.19
TRIM50Q86XT4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 CICP14-201ENST00000629111 2732 ntBASIC16.23■□□□□ 0.19
TRIM50Q86XT4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 AHCYP4-201ENST00000419201 1315 ntBASIC16.22■□□□□ 0.19
TRIM50Q86XT4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 RN7SL258P-201ENST00000478664 300 ntBASIC16.22■□□□□ 0.19
TRIM50Q86XT4 AC008723.1-201ENST00000506922 207 ntBASIC16.22■□□□□ 0.19
TRIM50Q86XT4 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 PHBP15-201ENST00000574228 665 ntBASIC16.22■□□□□ 0.19
TRIM50Q86XT4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 AC018635.2-201ENST00000608625 364 ntBASIC16.22■□□□□ 0.19
TRIM50Q86XT4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 FAM90A2P-201ENST00000511144 1395 ntBASIC16.22■□□□□ 0.19
TRIM50Q86XT4 FAM90A25P-201ENST00000528404 1395 ntBASIC16.22■□□□□ 0.19
TRIM50Q86XT4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM50Q86XT4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 STK33P1-201ENST00000423835 1218 ntBASIC16.21■□□□□ 0.19
TRIM50Q86XT4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM50Q86XT4 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms