Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USH1GQ495M9 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.71■□□□□ 0.27
USH1GQ495M9 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USH1GQ495M9 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
USH1GQ495M9 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.71■□□□□ 0.27
USH1GQ495M9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
USH1GQ495M9 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
USH1GQ495M9 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
USH1GQ495M9 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
USH1GQ495M9 FRMPD2B-201ENST00000431305 1347 ntBASIC16.7■□□□□ 0.26
USH1GQ495M9 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.7■□□□□ 0.26
USH1GQ495M9 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.7■□□□□ 0.26
USH1GQ495M9 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
USH1GQ495M9 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
USH1GQ495M9 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.7■□□□□ 0.26
USH1GQ495M9 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 TSPY25P-201ENST00000429463 745 ntBASIC16.7■□□□□ 0.26
USH1GQ495M9 ST13P19-201ENST00000442505 1124 ntBASIC16.7■□□□□ 0.26
USH1GQ495M9 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.7■□□□□ 0.26
USH1GQ495M9 POU5F1P2-201ENST00000521750 823 ntBASIC16.7■□□□□ 0.26
USH1GQ495M9 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.7■□□□□ 0.26
USH1GQ495M9 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.7■□□□□ 0.26
USH1GQ495M9 MIR3907-201ENST00000579424 151 ntBASIC16.7■□□□□ 0.26
USH1GQ495M9 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.7■□□□□ 0.26
USH1GQ495M9 AC016629.1-201ENST00000596579 586 ntBASIC16.7■□□□□ 0.26
USH1GQ495M9 AL109837.1-201ENST00000603272 613 ntBASIC16.7■□□□□ 0.26
USH1GQ495M9 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.7■□□□□ 0.26
USH1GQ495M9 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
USH1GQ495M9 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.7■□□□□ 0.26
USH1GQ495M9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.7■□□□□ 0.26
USH1GQ495M9 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
USH1GQ495M9 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
USH1GQ495M9 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
USH1GQ495M9 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.69■□□□□ 0.26
USH1GQ495M9 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USH1GQ495M9 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.69■□□□□ 0.26
USH1GQ495M9 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.69■□□□□ 0.26
USH1GQ495M9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.69■□□□□ 0.26
USH1GQ495M9 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
USH1GQ495M9 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USH1GQ495M9 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USH1GQ495M9 RNA5SP359-201ENST00000364838 113 ntBASIC16.69■□□□□ 0.26
USH1GQ495M9 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USH1GQ495M9 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
USH1GQ495M9 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.69■□□□□ 0.26
USH1GQ495M9 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.69■□□□□ 0.26
USH1GQ495M9 AL353637.1-201ENST00000451571 732 ntBASIC16.69■□□□□ 0.26
USH1GQ495M9 IGLV3-15-201ENST00000518356 244 ntBASIC16.69■□□□□ 0.26
USH1GQ495M9 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.69■□□□□ 0.26
USH1GQ495M9 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.69■□□□□ 0.26
USH1GQ495M9 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.69■□□□□ 0.26
USH1GQ495M9 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.69■□□□□ 0.26
USH1GQ495M9 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USH1GQ495M9 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USH1GQ495M9 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
USH1GQ495M9 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
USH1GQ495M9 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USH1GQ495M9 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USH1GQ495M9 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.69■□□□□ 0.26
USH1GQ495M9 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.69■□□□□ 0.26
USH1GQ495M9 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.69■□□□□ 0.26
USH1GQ495M9 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.69■□□□□ 0.26
USH1GQ495M9 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
USH1GQ495M9 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USH1GQ495M9 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USH1GQ495M9 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.69■□□□□ 0.26
USH1GQ495M9 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.69■□□□□ 0.26
USH1GQ495M9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
USH1GQ495M9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
USH1GQ495M9 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USH1GQ495M9 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.68■□□□□ 0.26
USH1GQ495M9 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USH1GQ495M9 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.68■□□□□ 0.26
USH1GQ495M9 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USH1GQ495M9 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.68■□□□□ 0.26
USH1GQ495M9 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USH1GQ495M9 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
USH1GQ495M9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
USH1GQ495M9 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USH1GQ495M9 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms