Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.98■□□□□ 0.31
RHBDL3P58872 AL512310.5-201ENST00000551999 515 ntBASIC16.98■□□□□ 0.31
RHBDL3P58872 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.98■□□□□ 0.31
RHBDL3P58872 RN7SL455P-201ENST00000580629 282 ntBASIC16.98■□□□□ 0.31
RHBDL3P58872 RN7SL470P-201ENST00000583069 259 ntBASIC16.98■□□□□ 0.31
RHBDL3P58872 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RHBDL3P58872 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC16.98■□□□□ 0.31
RHBDL3P58872 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.98■□□□□ 0.31
RHBDL3P58872 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.98■□□□□ 0.31
RHBDL3P58872 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RHBDL3P58872 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RHBDL3P58872 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RHBDL3P58872 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RHBDL3P58872 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RHBDL3P58872 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.98■□□□□ 0.31
RHBDL3P58872 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RHBDL3P58872 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.98■□□□□ 0.31
RHBDL3P58872 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RHBDL3P58872 AC140479.7-201ENST00000636301 2332 ntBASIC16.98■□□□□ 0.31
RHBDL3P58872 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RHBDL3P58872 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RHBDL3P58872 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RHBDL3P58872 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RHBDL3P58872 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.98■□□□□ 0.31
RHBDL3P58872 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.98■□□□□ 0.31
RHBDL3P58872 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.97■□□□□ 0.31
RHBDL3P58872 SHMT1P1-201ENST00000419974 1312 ntBASIC16.97■□□□□ 0.31
RHBDL3P58872 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.97■□□□□ 0.31
RHBDL3P58872 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RHBDL3P58872 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RHBDL3P58872 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RHBDL3P58872 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.97■□□□□ 0.31
RHBDL3P58872 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RHBDL3P58872 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.97■□□□□ 0.31
RHBDL3P58872 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RHBDL3P58872 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RHBDL3P58872 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RHBDL3P58872 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RHBDL3P58872 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
RHBDL3P58872 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RHBDL3P58872 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RHBDL3P58872 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.97■□□□□ 0.31
RHBDL3P58872 AC006987.1-201ENST00000413610 527 ntBASIC16.97■□□□□ 0.31
RHBDL3P58872 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.97■□□□□ 0.31
RHBDL3P58872 AC012362.1-201ENST00000434906 739 ntBASIC16.97■□□□□ 0.31
RHBDL3P58872 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.97■□□□□ 0.31
RHBDL3P58872 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.97■□□□□ 0.31
RHBDL3P58872 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.97■□□□□ 0.31
RHBDL3P58872 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RHBDL3P58872 KLF17P1-201ENST00000547105 1126 ntBASIC16.97■□□□□ 0.31
RHBDL3P58872 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.97■□□□□ 0.31
RHBDL3P58872 AC068867.1-201ENST00000559855 150 ntBASIC16.97■□□□□ 0.31
RHBDL3P58872 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
RHBDL3P58872 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
RHBDL3P58872 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
RHBDL3P58872 AC097359.2-201ENST00000604992 2389 ntBASIC16.97■□□□□ 0.31
RHBDL3P58872 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RHBDL3P58872 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
RHBDL3P58872 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
RHBDL3P58872 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.97■□□□□ 0.31
RHBDL3P58872 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RHBDL3P58872 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RHBDL3P58872 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RHBDL3P58872 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RHBDL3P58872 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RHBDL3P58872 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.97■□□□□ 0.31
RHBDL3P58872 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RHBDL3P58872 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RHBDL3P58872 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDL3P58872 AC015802.1-201ENST00000588104 1449 ntBASIC16.96■□□□□ 0.31
RHBDL3P58872 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDL3P58872 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.96■□□□□ 0.31
RHBDL3P58872 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDL3P58872 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RHBDL3P58872 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDL3P58872 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDL3P58872 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDL3P58872 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RHBDL3P58872 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.96■□□□□ 0.31
RHBDL3P58872 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.96■□□□□ 0.31
RHBDL3P58872 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.96■□□□□ 0.31
RHBDL3P58872 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDL3P58872 AL357563.1-201ENST00000404728 395 ntBASIC16.96■□□□□ 0.31
RHBDL3P58872 AC098934.1-203ENST00000442868 1262 ntBASIC16.96■□□□□ 0.31
RHBDL3P58872 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.96■□□□□ 0.31
RHBDL3P58872 DPY19L2P5-201ENST00000456300 331 ntBASIC16.96■□□□□ 0.31
RHBDL3P58872 SCARNA12-201ENST00000459155 270 ntBASIC16.96■□□□□ 0.31
RHBDL3P58872 OR5BD1P-201ENST00000532527 817 ntBASIC16.96■□□□□ 0.31
RHBDL3P58872 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.96■□□□□ 0.31
RHBDL3P58872 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDL3P58872 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDL3P58872 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
RHBDL3P58872 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.96■□□□□ 0.31
RHBDL3P58872 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.96■□□□□ 0.31
RHBDL3P58872 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.96■□□□□ 0.31
RHBDL3P58872 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDL3P58872 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDL3P58872 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDL3P58872 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDL3P58872 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms