Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.5□□□□□ -0.25
SMIM11AP58511 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
SMIM11AP58511 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.5□□□□□ -0.25
SMIM11AP58511 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.5□□□□□ -0.25
SMIM11AP58511 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SMIM11AP58511 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
SMIM11AP58511 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SMIM11AP58511 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.5□□□□□ -0.25
SMIM11AP58511 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.5□□□□□ -0.25
SMIM11AP58511 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.5□□□□□ -0.25
SMIM11AP58511 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.5□□□□□ -0.25
SMIM11AP58511 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.5□□□□□ -0.25
SMIM11AP58511 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 TMEM261P1-201ENST00000604899 340 ntBASIC13.5□□□□□ -0.25
SMIM11AP58511 AC004790.1-201ENST00000612686 536 ntBASIC13.5□□□□□ -0.25
SMIM11AP58511 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.5□□□□□ -0.25
SMIM11AP58511 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
SMIM11AP58511 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.5□□□□□ -0.25
SMIM11AP58511 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SMIM11AP58511 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 AC015909.5-201ENST00000624336 2266 ntBASIC13.5□□□□□ -0.25
SMIM11AP58511 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.49□□□□□ -0.25
SMIM11AP58511 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.49□□□□□ -0.25
SMIM11AP58511 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SMIM11AP58511 AL391825.1-201ENST00000457671 1364 ntBASIC13.49□□□□□ -0.25
SMIM11AP58511 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SMIM11AP58511 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
SMIM11AP58511 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SMIM11AP58511 KRT18P28-201ENST00000453838 1332 ntBASIC13.49□□□□□ -0.25
SMIM11AP58511 AC064801.2-201ENST00000625052 1303 ntBASIC13.49□□□□□ -0.25
SMIM11AP58511 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SMIM11AP58511 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.49□□□□□ -0.25
SMIM11AP58511 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.49□□□□□ -0.25
SMIM11AP58511 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
SMIM11AP58511 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.49□□□□□ -0.25
SMIM11AP58511 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.49□□□□□ -0.25
SMIM11AP58511 AC004466.1-201ENST00000599515 1080 ntBASIC13.49□□□□□ -0.25
SMIM11AP58511 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.49□□□□□ -0.25
SMIM11AP58511 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.49□□□□□ -0.25
SMIM11AP58511 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SMIM11AP58511 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.49□□□□□ -0.25
SMIM11AP58511 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.49□□□□□ -0.25
SMIM11AP58511 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 AL359183.1-201ENST00000623796 2132 ntBASIC13.49□□□□□ -0.25
SMIM11AP58511 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.49□□□□□ -0.25
SMIM11AP58511 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 AL590440.2-201ENST00000641973 1595 ntBASIC13.49□□□□□ -0.25
SMIM11AP58511 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SMIM11AP58511 AC105206.1-202ENST00000314927 2368 ntBASIC13.49□□□□□ -0.25
SMIM11AP58511 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM11AP58511 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM11AP58511 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM11AP58511 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms