Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
VSX2P58304 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VSX2P58304 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VSX2P58304 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.01□□□□□ -0.17
VSX2P58304 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14□□□□□ -0.17
VSX2P58304 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14□□□□□ -0.17
VSX2P58304 MBLAC2-202ENST00000514906 1936 ntBASIC14□□□□□ -0.17
VSX2P58304 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14□□□□□ -0.17
VSX2P58304 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
VSX2P58304 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14□□□□□ -0.17
VSX2P58304 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14□□□□□ -0.17
VSX2P58304 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14□□□□□ -0.17
VSX2P58304 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14□□□□□ -0.17
VSX2P58304 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
VSX2P58304 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 AGER-203ENST00000375065 665 ntTSL 2 BASIC14□□□□□ -0.17
VSX2P58304 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14□□□□□ -0.17
VSX2P58304 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
VSX2P58304 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14□□□□□ -0.17
VSX2P58304 AL157407.1-201ENST00000435784 904 ntBASIC14□□□□□ -0.17
VSX2P58304 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14□□□□□ -0.17
VSX2P58304 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14□□□□□ -0.17
VSX2P58304 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14□□□□□ -0.17
VSX2P58304 AC091804.1-201ENST00000486888 567 ntBASIC14□□□□□ -0.17
VSX2P58304 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14□□□□□ -0.17
VSX2P58304 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14□□□□□ -0.17
VSX2P58304 AC005324.6-201ENST00000587972 613 ntBASIC14□□□□□ -0.17
VSX2P58304 AC020914.3-201ENST00000594712 304 ntBASIC14□□□□□ -0.17
VSX2P58304 KC6-205ENST00000599934 556 ntTSL 4 BASIC14□□□□□ -0.17
VSX2P58304 AC244452.3-201ENST00000636814 210 ntBASIC14□□□□□ -0.17
VSX2P58304 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14□□□□□ -0.17
VSX2P58304 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14□□□□□ -0.17
VSX2P58304 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14□□□□□ -0.17
VSX2P58304 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14□□□□□ -0.17
VSX2P58304 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
VSX2P58304 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
VSX2P58304 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
VSX2P58304 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14□□□□□ -0.17
VSX2P58304 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VSX2P58304 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14□□□□□ -0.17
VSX2P58304 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14□□□□□ -0.17
VSX2P58304 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14□□□□□ -0.17
VSX2P58304 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
VSX2P58304 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.99□□□□□ -0.17
VSX2P58304 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
VSX2P58304 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
VSX2P58304 KHSRPP1-201ENST00000427983 1768 ntBASIC13.99□□□□□ -0.17
VSX2P58304 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.99□□□□□ -0.17
VSX2P58304 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.99□□□□□ -0.17
VSX2P58304 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.99□□□□□ -0.17
VSX2P58304 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.99□□□□□ -0.17
VSX2P58304 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms