Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.45□□□□□ -0.26
CLDN20P56880 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.45□□□□□ -0.26
CLDN20P56880 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CLDN20P56880 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.45□□□□□ -0.26
CLDN20P56880 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.45□□□□□ -0.26
CLDN20P56880 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN20P56880 AL023775.1-201ENST00000454907 1746 ntBASIC13.44□□□□□ -0.26
CLDN20P56880 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN20P56880 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.44□□□□□ -0.26
CLDN20P56880 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN20P56880 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
CLDN20P56880 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CLDN20P56880 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CLDN20P56880 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CLDN20P56880 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN20P56880 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 AC004945.1-201ENST00000416738 983 ntBASIC13.44□□□□□ -0.26
CLDN20P56880 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN20P56880 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.44□□□□□ -0.26
CLDN20P56880 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.44□□□□□ -0.26
CLDN20P56880 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.44□□□□□ -0.26
CLDN20P56880 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.44□□□□□ -0.26
CLDN20P56880 ZACNP1-201ENST00000612259 710 ntBASIC13.44□□□□□ -0.26
CLDN20P56880 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.44□□□□□ -0.26
CLDN20P56880 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.44□□□□□ -0.26
CLDN20P56880 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.44□□□□□ -0.26
CLDN20P56880 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.44□□□□□ -0.26
CLDN20P56880 AC005562.1-201ENST00000583030 3219 ntBASIC13.44□□□□□ -0.26
CLDN20P56880 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN20P56880 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CLDN20P56880 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN20P56880 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.44□□□□□ -0.26
CLDN20P56880 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN20P56880 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN20P56880 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN20P56880 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN20P56880 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CLDN20P56880 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN20P56880 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.43□□□□□ -0.26
CLDN20P56880 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CLDN20P56880 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN20P56880 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CLDN20P56880 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN20P56880 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN20P56880 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN20P56880 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CLDN20P56880 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN20P56880 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN20P56880 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN20P56880 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN20P56880 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN20P56880 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN20P56880 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.43□□□□□ -0.26
CLDN20P56880 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN20P56880 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN20P56880 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN20P56880 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms