Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC13.97□□□□□ -0.17
CLDN6P56747 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN6P56747 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.97□□□□□ -0.17
CLDN6P56747 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN6P56747 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC13.97□□□□□ -0.17
CLDN6P56747 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN6P56747 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN6P56747 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN6P56747 AL022334.2-201ENST00000610000 484 ntBASIC13.97□□□□□ -0.17
CLDN6P56747 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CLDN6P56747 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN6P56747 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.97□□□□□ -0.17
CLDN6P56747 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN6P56747 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN6P56747 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CLDN6P56747 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN6P56747 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.97□□□□□ -0.17
CLDN6P56747 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 AC023157.3-201ENST00000619086 2088 ntBASIC13.97□□□□□ -0.17
CLDN6P56747 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN6P56747 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN6P56747 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CLDN6P56747 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CLDN6P56747 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.96□□□□□ -0.17
CLDN6P56747 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CLDN6P56747 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDN6P56747 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CLDN6P56747 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CLDN6P56747 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDN6P56747 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 STK16-203ENST00000409516 895 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDN6P56747 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.96□□□□□ -0.17
CLDN6P56747 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC13.96□□□□□ -0.17
CLDN6P56747 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC13.96□□□□□ -0.17
CLDN6P56747 DNM1P51-201ENST00000558149 522 ntBASIC13.96□□□□□ -0.17
CLDN6P56747 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.96□□□□□ -0.17
CLDN6P56747 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC13.96□□□□□ -0.17
CLDN6P56747 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 AL022344.2-201ENST00000568976 968 ntBASIC13.96□□□□□ -0.17
CLDN6P56747 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.96□□□□□ -0.17
CLDN6P56747 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDN6P56747 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC13.96□□□□□ -0.17
CLDN6P56747 HKR1-225ENST00000592168 566 ntTSL 4 BASIC13.96□□□□□ -0.17
CLDN6P56747 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 PCDHA3-202ENST00000532566 4594 ntBASIC13.96□□□□□ -0.17
CLDN6P56747 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDN6P56747 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN6P56747 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC13.96□□□□□ -0.17
CLDN6P56747 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDN6P56747 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN6P56747 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CLDN6P56747 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.96□□□□□ -0.18
CLDN6P56747 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN6P56747 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN6P56747 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN6P56747 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN6P56747 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN6P56747 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.96□□□□□ -0.18
CLDN6P56747 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN6P56747 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN6P56747 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN6P56747 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.96□□□□□ -0.18
CLDN6P56747 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN6P56747 MARK2P16-201ENST00000605714 1723 ntBASIC13.95□□□□□ -0.18
CLDN6P56747 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDN6P56747 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CLDN6P56747 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN6P56747 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN6P56747 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN6P56747 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN6P56747 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN6P56747 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN6P56747 CICP23-201ENST00000605013 2741 ntBASIC13.95□□□□□ -0.18
CLDN6P56747 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN6P56747 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms