Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.22□□□□□ -0.13
AP1S2P56377 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.22□□□□□ -0.13
AP1S2P56377 HSPA8P5-201ENST00000456928 2069 ntBASIC14.22□□□□□ -0.13
AP1S2P56377 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
AP1S2P56377 E2F3P2-201ENST00000447755 1422 ntBASIC14.22□□□□□ -0.13
AP1S2P56377 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
AP1S2P56377 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.22□□□□□ -0.13
AP1S2P56377 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S2P56377 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.21□□□□□ -0.13
AP1S2P56377 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
AP1S2P56377 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
AP1S2P56377 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.21□□□□□ -0.13
AP1S2P56377 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
AP1S2P56377 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.21□□□□□ -0.13
AP1S2P56377 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.21□□□□□ -0.13
AP1S2P56377 AC099336.1-201ENST00000417053 1171 ntBASIC14.21□□□□□ -0.13
AP1S2P56377 AL157407.1-201ENST00000435784 904 ntBASIC14.21□□□□□ -0.13
AP1S2P56377 AC022210.1-201ENST00000449856 793 ntBASIC14.21□□□□□ -0.13
AP1S2P56377 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.21□□□□□ -0.13
AP1S2P56377 MIR6720-201ENST00000611664 98 ntBASIC14.21□□□□□ -0.13
AP1S2P56377 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.21□□□□□ -0.13
AP1S2P56377 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.21□□□□□ -0.13
AP1S2P56377 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.21□□□□□ -0.13
AP1S2P56377 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
AP1S2P56377 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.21□□□□□ -0.13
AP1S2P56377 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
AP1S2P56377 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S2P56377 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
AP1S2P56377 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
AP1S2P56377 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.21□□□□□ -0.14
AP1S2P56377 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
AP1S2P56377 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
AP1S2P56377 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
AP1S2P56377 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.2□□□□□ -0.14
AP1S2P56377 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.2□□□□□ -0.14
AP1S2P56377 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
AP1S2P56377 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
AP1S2P56377 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.2□□□□□ -0.14
AP1S2P56377 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.2□□□□□ -0.14
AP1S2P56377 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
AP1S2P56377 AC117489.1-201ENST00000625169 3217 ntBASIC14.2□□□□□ -0.14
AP1S2P56377 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
AP1S2P56377 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
AP1S2P56377 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.2□□□□□ -0.14
AP1S2P56377 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
AP1S2P56377 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.2□□□□□ -0.14
AP1S2P56377 AL645933.1-201ENST00000440087 609 ntBASIC14.2□□□□□ -0.14
AP1S2P56377 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
AP1S2P56377 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S2P56377 HILS1-202ENST00000545329 423 ntBASIC14.2□□□□□ -0.14
AP1S2P56377 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
AP1S2P56377 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms