Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 C8orf49-201ENST00000525043 1968 ntBASIC13.01□□□□□ -0.33
GFRA1P56159 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.01□□□□□ -0.33
GFRA1P56159 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.01□□□□□ -0.33
GFRA1P56159 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.01□□□□□ -0.33
GFRA1P56159 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.01□□□□□ -0.33
GFRA1P56159 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
GFRA1P56159 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
GFRA1P56159 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.01□□□□□ -0.33
GFRA1P56159 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
GFRA1P56159 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.01□□□□□ -0.33
GFRA1P56159 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.01□□□□□ -0.33
GFRA1P56159 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.01□□□□□ -0.33
GFRA1P56159 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.01□□□□□ -0.33
GFRA1P56159 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.01□□□□□ -0.33
GFRA1P56159 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.01□□□□□ -0.33
GFRA1P56159 RN7SL720P-201ENST00000488178 304 ntBASIC13.01□□□□□ -0.33
GFRA1P56159 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.01□□□□□ -0.33
GFRA1P56159 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.01□□□□□ -0.33
GFRA1P56159 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.01□□□□□ -0.33
GFRA1P56159 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.01□□□□□ -0.33
GFRA1P56159 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
GFRA1P56159 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.01□□□□□ -0.33
GFRA1P56159 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.01□□□□□ -0.33
GFRA1P56159 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.01□□□□□ -0.33
GFRA1P56159 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.01□□□□□ -0.33
GFRA1P56159 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.01□□□□□ -0.33
GFRA1P56159 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.01□□□□□ -0.33
GFRA1P56159 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.01□□□□□ -0.33
GFRA1P56159 AC020922.3-201ENST00000595064 547 ntBASIC13.01□□□□□ -0.33
GFRA1P56159 AC106872.11-201ENST00000605838 421 ntBASIC13.01□□□□□ -0.33
GFRA1P56159 AL606495.2-201ENST00000605867 535 ntBASIC13.01□□□□□ -0.33
GFRA1P56159 MEG3_2.1-201ENST00000611456 105 ntBASIC13.01□□□□□ -0.33
GFRA1P56159 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.01□□□□□ -0.33
GFRA1P56159 AL353770.1-201ENST00000614915 403 ntBASIC13.01□□□□□ -0.33
GFRA1P56159 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 FRMPD2B-201ENST00000431305 1347 ntBASIC13.01□□□□□ -0.33
GFRA1P56159 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.01□□□□□ -0.33
GFRA1P56159 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.01□□□□□ -0.33
GFRA1P56159 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
GFRA1P56159 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
GFRA1P56159 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.01□□□□□ -0.33
GFRA1P56159 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.01□□□□□ -0.33
GFRA1P56159 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFRA1P56159 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
GFRA1P56159 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 AC097359.2-201ENST00000604992 2389 ntBASIC13□□□□□ -0.33
GFRA1P56159 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13□□□□□ -0.33
GFRA1P56159 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13□□□□□ -0.33
GFRA1P56159 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
GFRA1P56159 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
GFRA1P56159 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13□□□□□ -0.33
GFRA1P56159 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13□□□□□ -0.33
GFRA1P56159 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
GFRA1P56159 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
GFRA1P56159 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13□□□□□ -0.33
GFRA1P56159 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13□□□□□ -0.33
GFRA1P56159 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13□□□□□ -0.33
GFRA1P56159 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 AC092580.1-201ENST00000433998 658 ntBASIC13□□□□□ -0.33
GFRA1P56159 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13□□□□□ -0.33
GFRA1P56159 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13□□□□□ -0.33
GFRA1P56159 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13□□□□□ -0.33
GFRA1P56159 UPF3AP2-201ENST00000457924 1132 ntBASIC13□□□□□ -0.33
GFRA1P56159 RN7SL769P-201ENST00000469386 295 ntBASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms