Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH4P55283 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH4P55283 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH4P55283 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH4P55283 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CDH4P55283 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDH4P55283 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 AC005912.2-201ENST00000619492 2400 ntBASIC14.85□□□□□ -0.03
CDH4P55283 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH4P55283 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH4P55283 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
CDH4P55283 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CDH4P55283 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH4P55283 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.85□□□□□ -0.03
CDH4P55283 AC090857.1-201ENST00000527400 390 ntBASIC14.85□□□□□ -0.03
CDH4P55283 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH4P55283 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CDH4P55283 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.85□□□□□ -0.03
CDH4P55283 AC140658.4-201ENST00000561990 352 ntBASIC14.85□□□□□ -0.03
CDH4P55283 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.85□□□□□ -0.03
CDH4P55283 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH4P55283 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.85□□□□□ -0.03
CDH4P55283 MIR3188-201ENST00000583494 85 ntBASIC14.85□□□□□ -0.03
CDH4P55283 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH4P55283 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
CDH4P55283 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.85□□□□□ -0.03
CDH4P55283 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CDH4P55283 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH4P55283 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH4P55283 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH4P55283 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH4P55283 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH4P55283 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH4P55283 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH4P55283 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH4P55283 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH4P55283 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CDH4P55283 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH4P55283 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH4P55283 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDH4P55283 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
CDH4P55283 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH4P55283 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH4P55283 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH4P55283 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH4P55283 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH4P55283 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CDH4P55283 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH4P55283 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH4P55283 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH4P55283 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH4P55283 ACTG1P2-201ENST00000415776 1125 ntBASIC14.84□□□□□ -0.03
CDH4P55283 ACTG1P11-201ENST00000425411 1125 ntBASIC14.84□□□□□ -0.03
CDH4P55283 TSPY25P-201ENST00000429463 745 ntBASIC14.84□□□□□ -0.03
CDH4P55283 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.84□□□□□ -0.03
CDH4P55283 RN7SL11P-201ENST00000471305 293 ntBASIC14.84□□□□□ -0.03
CDH4P55283 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH4P55283 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH4P55283 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CDH4P55283 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
CDH4P55283 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH4P55283 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH4P55283 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH4P55283 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH4P55283 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CDH4P55283 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH4P55283 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH4P55283 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH4P55283 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH4P55283 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH4P55283 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.83□□□□□ -0.03
CDH4P55283 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.83□□□□□ -0.03
CDH4P55283 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms