Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFC1P35251 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFC1P35251 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.42■□□□□ 0.06
RFC1P35251 SORD2P-201ENST00000558556 1069 ntBASIC15.42■□□□□ 0.06
RFC1P35251 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.42■□□□□ 0.06
RFC1P35251 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.42■□□□□ 0.06
RFC1P35251 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFC1P35251 AC008825.2-201ENST00000603374 718 ntBASIC15.42■□□□□ 0.06
RFC1P35251 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RFC1P35251 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.42■□□□□ 0.06
RFC1P35251 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RFC1P35251 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFC1P35251 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFC1P35251 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFC1P35251 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFC1P35251 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.42■□□□□ 0.06
RFC1P35251 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.42■□□□□ 0.06
RFC1P35251 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFC1P35251 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFC1P35251 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RFC1P35251 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFC1P35251 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFC1P35251 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFC1P35251 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RFC1P35251 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFC1P35251 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFC1P35251 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFC1P35251 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFC1P35251 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RFC1P35251 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.41■□□□□ 0.06
RFC1P35251 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
RFC1P35251 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 GRK6P1-201ENST00000400595 1711 ntBASIC15.41■□□□□ 0.06
RFC1P35251 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.41■□□□□ 0.06
RFC1P35251 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.41■□□□□ 0.06
RFC1P35251 AC010141.1-201ENST00000411585 623 ntBASIC15.41■□□□□ 0.06
RFC1P35251 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RFC1P35251 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.41■□□□□ 0.06
RFC1P35251 HIST2H2BB-201ENST00000449108 381 ntBASIC15.41■□□□□ 0.06
RFC1P35251 HOMER2P2-201ENST00000451621 847 ntBASIC15.41■□□□□ 0.06
RFC1P35251 ACA64.2-201ENST00000459014 129 ntBASIC15.41■□□□□ 0.06
RFC1P35251 AC104989.1-201ENST00000519711 778 ntBASIC15.41■□□□□ 0.06
RFC1P35251 AC079316.1-201ENST00000548397 411 ntBASIC15.41■□□□□ 0.06
RFC1P35251 AC023310.1-201ENST00000554836 735 ntBASIC15.41■□□□□ 0.06
RFC1P35251 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.41■□□□□ 0.06
RFC1P35251 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.41■□□□□ 0.06
RFC1P35251 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.41■□□□□ 0.06
RFC1P35251 AL136301.1-201ENST00000615830 422 ntBASIC15.41■□□□□ 0.06
RFC1P35251 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RFC1P35251 AC027601.3-201ENST00000622907 509 ntBASIC15.41■□□□□ 0.06
RFC1P35251 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.41■□□□□ 0.06
RFC1P35251 AC016397.2-201ENST00000624848 1985 ntBASIC15.41■□□□□ 0.06
RFC1P35251 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RFC1P35251 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RFC1P35251 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RFC1P35251 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RFC1P35251 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFC1P35251 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RFC1P35251 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFC1P35251 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.4■□□□□ 0.06
RFC1P35251 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFC1P35251 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFC1P35251 AC020910.6-201ENST00000623084 1459 ntBASIC15.4■□□□□ 0.06
RFC1P35251 SHC1P1-201ENST00000425230 1745 ntBASIC15.4■□□□□ 0.06
RFC1P35251 C8orf49-201ENST00000525043 1968 ntBASIC15.4■□□□□ 0.06
RFC1P35251 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFC1P35251 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFC1P35251 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFC1P35251 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFC1P35251 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
RFC1P35251 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RFC1P35251 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.4■□□□□ 0.06
RFC1P35251 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.4■□□□□ 0.06
RFC1P35251 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.4■□□□□ 0.06
RFC1P35251 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.4■□□□□ 0.06
RFC1P35251 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.4■□□□□ 0.06
RFC1P35251 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFC1P35251 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.4■□□□□ 0.06
RFC1P35251 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.4■□□□□ 0.06
RFC1P35251 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.4■□□□□ 0.06
RFC1P35251 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.4■□□□□ 0.06
RFC1P35251 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms