Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.81□□□□□ -0.04
RPA3P35244 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.81□□□□□ -0.04
RPA3P35244 AP001063.1-201ENST00000568332 529 ntBASIC14.81□□□□□ -0.04
RPA3P35244 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.81□□□□□ -0.04
RPA3P35244 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.81□□□□□ -0.04
RPA3P35244 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.81□□□□□ -0.04
RPA3P35244 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.81□□□□□ -0.04
RPA3P35244 AL136172.1-201ENST00000598590 1394 ntBASIC14.81□□□□□ -0.04
RPA3P35244 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
RPA3P35244 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.81□□□□□ -0.04
RPA3P35244 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.81□□□□□ -0.04
RPA3P35244 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
RPA3P35244 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 AC015688.4-201ENST00000580780 1647 ntBASIC14.81□□□□□ -0.04
RPA3P35244 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.81□□□□□ -0.04
RPA3P35244 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.8□□□□□ -0.04
RPA3P35244 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.8□□□□□ -0.04
RPA3P35244 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 AC114271.1-201ENST00000612689 2813 ntBASIC14.8□□□□□ -0.04
RPA3P35244 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RPA3P35244 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.8□□□□□ -0.04
RPA3P35244 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RPA3P35244 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.8□□□□□ -0.04
RPA3P35244 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
RPA3P35244 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.8□□□□□ -0.04
RPA3P35244 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.8□□□□□ -0.04
RPA3P35244 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
RPA3P35244 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RPA3P35244 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
RPA3P35244 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.8□□□□□ -0.04
RPA3P35244 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.8□□□□□ -0.04
RPA3P35244 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.8□□□□□ -0.04
RPA3P35244 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.8□□□□□ -0.04
RPA3P35244 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 AC026434.2-201ENST00000506094 1078 ntBASIC14.8□□□□□ -0.04
RPA3P35244 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RPA3P35244 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
RPA3P35244 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.8□□□□□ -0.04
RPA3P35244 AC009486.1-201ENST00000569860 813 ntBASIC14.8□□□□□ -0.04
RPA3P35244 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.8□□□□□ -0.04
RPA3P35244 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.8□□□□□ -0.04
RPA3P35244 AC005252.2-201ENST00000624630 1141 ntBASIC14.8□□□□□ -0.04
RPA3P35244 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.8□□□□□ -0.04
RPA3P35244 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 CU639417.3-201ENST00000624240 1404 ntBASIC14.8□□□□□ -0.04
RPA3P35244 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.8□□□□□ -0.04
RPA3P35244 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RPA3P35244 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 C8orf49-201ENST00000525043 1968 ntBASIC14.8□□□□□ -0.04
RPA3P35244 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RPA3P35244 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.8□□□□□ -0.04
RPA3P35244 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.8□□□□□ -0.04
RPA3P35244 AC083964.2-201ENST00000623988 2396 ntBASIC14.8□□□□□ -0.04
RPA3P35244 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPA3P35244 Z82170.1-201ENST00000625081 3192 ntBASIC14.79□□□□□ -0.04
RPA3P35244 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RPA3P35244 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.79□□□□□ -0.04
RPA3P35244 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.79□□□□□ -0.04
RPA3P35244 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RPA3P35244 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RPA3P35244 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.79□□□□□ -0.04
RPA3P35244 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms