Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CCKBRP32239 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CCKBRP32239 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.03□□□□□ -0.16
CCKBRP32239 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.03□□□□□ -0.16
CCKBRP32239 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.03□□□□□ -0.16
CCKBRP32239 AC078991.1-201ENST00000437297 610 ntBASIC14.03□□□□□ -0.16
CCKBRP32239 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.03□□□□□ -0.16
CCKBRP32239 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CCKBRP32239 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.03□□□□□ -0.16
CCKBRP32239 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.03□□□□□ -0.16
CCKBRP32239 PHBP15-201ENST00000574228 665 ntBASIC14.03□□□□□ -0.16
CCKBRP32239 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC14.03□□□□□ -0.16
CCKBRP32239 MIR3677-201ENST00000578964 60 ntBASIC14.03□□□□□ -0.16
CCKBRP32239 MIR4750-201ENST00000584564 56 ntBASIC14.03□□□□□ -0.16
CCKBRP32239 AC092171.5-201ENST00000608012 942 ntBASIC14.03□□□□□ -0.16
CCKBRP32239 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.03□□□□□ -0.16
CCKBRP32239 RN7SL736P-201ENST00000613111 269 ntBASIC14.03□□□□□ -0.16
CCKBRP32239 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.03□□□□□ -0.16
CCKBRP32239 AHCYP4-201ENST00000419201 1315 ntBASIC14.03□□□□□ -0.16
CCKBRP32239 AC074138.1-201ENST00000611182 1303 ntBASIC14.03□□□□□ -0.16
CCKBRP32239 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CCKBRP32239 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CCKBRP32239 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.03□□□□□ -0.16
CCKBRP32239 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CCKBRP32239 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.03□□□□□ -0.16
CCKBRP32239 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.03□□□□□ -0.16
CCKBRP32239 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.03□□□□□ -0.16
CCKBRP32239 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 AC138969.2-201ENST00000532739 9932 ntBASIC14.03□□□□□ -0.16
CCKBRP32239 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCKBRP32239 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCKBRP32239 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.02□□□□□ -0.16
CCKBRP32239 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCKBRP32239 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCKBRP32239 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCKBRP32239 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCKBRP32239 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCKBRP32239 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCKBRP32239 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCKBRP32239 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.02□□□□□ -0.16
CCKBRP32239 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CCKBRP32239 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCKBRP32239 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CCKBRP32239 AC018629.1-201ENST00000623381 1736 ntBASIC14.02□□□□□ -0.16
CCKBRP32239 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
CCKBRP32239 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CCKBRP32239 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCKBRP32239 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
CCKBRP32239 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CCKBRP32239 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.02□□□□□ -0.16
CCKBRP32239 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCKBRP32239 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCKBRP32239 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.02□□□□□ -0.17
CCKBRP32239 CAP2P1-201ENST00000557743 1390 ntBASIC14.02□□□□□ -0.17
CCKBRP32239 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCKBRP32239 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCKBRP32239 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCKBRP32239 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.02□□□□□ -0.17
CCKBRP32239 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.02□□□□□ -0.17
CCKBRP32239 KRT18P36-201ENST00000411618 1276 ntBASIC14.02□□□□□ -0.17
CCKBRP32239 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.02□□□□□ -0.17
CCKBRP32239 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCKBRP32239 RPL8P2-201ENST00000430538 502 ntBASIC14.02□□□□□ -0.17
CCKBRP32239 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.02□□□□□ -0.17
CCKBRP32239 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCKBRP32239 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCKBRP32239 AC130709.1-201ENST00000484779 1212 ntBASIC14.02□□□□□ -0.17
CCKBRP32239 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.02□□□□□ -0.17
CCKBRP32239 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.02□□□□□ -0.17
CCKBRP32239 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCKBRP32239 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.02□□□□□ -0.17
CCKBRP32239 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.02□□□□□ -0.17
CCKBRP32239 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CCKBRP32239 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CCKBRP32239 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.02□□□□□ -0.17
CCKBRP32239 AC087045.2-201ENST00000606279 1003 ntBASIC14.02□□□□□ -0.17
CCKBRP32239 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CCKBRP32239 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCKBRP32239 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CCKBRP32239 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms