Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC6A4P31645 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A4P31645 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC6A4P31645 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A4P31645 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A4P31645 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A4P31645 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A4P31645 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
SLC6A4P31645 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC6A4P31645 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SLC6A4P31645 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SLC6A4P31645 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A4P31645 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC6A4P31645 AC139749.1-202ENST00000617529 3139 ntBASIC14.9□□□□□ -0.02
SLC6A4P31645 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.9□□□□□ -0.02
SLC6A4P31645 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A4P31645 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A4P31645 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.9□□□□□ -0.02
SLC6A4P31645 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC6A4P31645 AC092580.1-201ENST00000433998 658 ntBASIC14.9□□□□□ -0.02
SLC6A4P31645 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.9□□□□□ -0.02
SLC6A4P31645 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC6A4P31645 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC6A4P31645 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.9□□□□□ -0.02
SLC6A4P31645 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.9□□□□□ -0.02
SLC6A4P31645 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC6A4P31645 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC6A4P31645 FGFR3P5-201ENST00000564496 886 ntBASIC14.9□□□□□ -0.02
SLC6A4P31645 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC6A4P31645 AC020922.3-201ENST00000595064 547 ntBASIC14.9□□□□□ -0.02
SLC6A4P31645 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A4P31645 AC104506.1-201ENST00000609247 429 ntBASIC14.9□□□□□ -0.02
SLC6A4P31645 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A4P31645 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A4P31645 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SLC6A4P31645 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A4P31645 AC015909.3-201ENST00000572855 1794 ntBASIC14.9□□□□□ -0.02
SLC6A4P31645 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SLC6A4P31645 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A4P31645 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC6A4P31645 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SLC6A4P31645 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SLC6A4P31645 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
SLC6A4P31645 AC005912.2-201ENST00000619492 2400 ntBASIC14.9□□□□□ -0.02
SLC6A4P31645 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SLC6A4P31645 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC6A4P31645 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC6A4P31645 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC6A4P31645 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SLC6A4P31645 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SLC6A4P31645 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC6A4P31645 RNA5SP359-201ENST00000364838 113 ntBASIC14.89□□□□□ -0.03
SLC6A4P31645 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.89□□□□□ -0.03
SLC6A4P31645 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC6A4P31645 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.89□□□□□ -0.03
SLC6A4P31645 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC6A4P31645 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.89□□□□□ -0.03
SLC6A4P31645 AC116345.2-201ENST00000512837 523 ntBASIC14.89□□□□□ -0.03
SLC6A4P31645 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.89□□□□□ -0.03
SLC6A4P31645 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.89□□□□□ -0.03
SLC6A4P31645 MIR3188-201ENST00000583494 85 ntBASIC14.89□□□□□ -0.03
SLC6A4P31645 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.89□□□□□ -0.03
SLC6A4P31645 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC6A4P31645 AC021016.3-201ENST00000608367 477 ntBASIC14.89□□□□□ -0.03
SLC6A4P31645 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC6A4P31645 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC6A4P31645 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC6A4P31645 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SLC6A4P31645 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SLC6A4P31645 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
SLC6A4P31645 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC6A4P31645 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A4P31645 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms