Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
EPHA3P29320 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.26□□□□□ -0.13
EPHA3P29320 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.26□□□□□ -0.13
EPHA3P29320 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.26□□□□□ -0.13
EPHA3P29320 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.26□□□□□ -0.13
EPHA3P29320 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.26□□□□□ -0.13
EPHA3P29320 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.26□□□□□ -0.13
EPHA3P29320 RRP7BP-205ENST00000566851 833 ntBASIC14.26□□□□□ -0.13
EPHA3P29320 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.26□□□□□ -0.13
EPHA3P29320 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.26□□□□□ -0.13
EPHA3P29320 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.26□□□□□ -0.13
EPHA3P29320 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.26□□□□□ -0.13
EPHA3P29320 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
EPHA3P29320 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.26□□□□□ -0.13
EPHA3P29320 AC020910.5-201ENST00000623668 1865 ntBASIC14.26□□□□□ -0.13
EPHA3P29320 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.26□□□□□ -0.13
EPHA3P29320 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.26□□□□□ -0.13
EPHA3P29320 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
EPHA3P29320 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.26□□□□□ -0.13
EPHA3P29320 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
EPHA3P29320 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.26□□□□□ -0.13
EPHA3P29320 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.26□□□□□ -0.13
EPHA3P29320 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.26□□□□□ -0.13
EPHA3P29320 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.26□□□□□ -0.13
EPHA3P29320 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
EPHA3P29320 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.25□□□□□ -0.13
EPHA3P29320 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.25□□□□□ -0.13
EPHA3P29320 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.25□□□□□ -0.13
EPHA3P29320 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.25□□□□□ -0.13
EPHA3P29320 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.25□□□□□ -0.13
EPHA3P29320 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.25□□□□□ -0.13
EPHA3P29320 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
EPHA3P29320 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
EPHA3P29320 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
EPHA3P29320 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.25□□□□□ -0.13
EPHA3P29320 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
EPHA3P29320 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 AL359711.2-201ENST00000563105 872 ntBASIC14.25□□□□□ -0.13
EPHA3P29320 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.25□□□□□ -0.13
EPHA3P29320 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.25□□□□□ -0.13
EPHA3P29320 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.25□□□□□ -0.13
EPHA3P29320 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
EPHA3P29320 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
EPHA3P29320 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
EPHA3P29320 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
EPHA3P29320 CR383656.2-201ENST00000548656 2254 ntBASIC14.25□□□□□ -0.13
EPHA3P29320 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.25□□□□□ -0.13
EPHA3P29320 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA3P29320 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
EPHA3P29320 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA3P29320 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA3P29320 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA3P29320 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA3P29320 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
EPHA3P29320 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
EPHA3P29320 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA3P29320 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
EPHA3P29320 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA3P29320 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
EPHA3P29320 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
EPHA3P29320 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
EPHA3P29320 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA3P29320 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.24□□□□□ -0.13
EPHA3P29320 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA3P29320 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.24□□□□□ -0.13
EPHA3P29320 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
EPHA3P29320 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA3P29320 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
EPHA3P29320 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA3P29320 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
EPHA3P29320 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
EPHA3P29320 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms