Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.85□□□□□ -0.19
LAMA1P25391 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC13.85□□□□□ -0.19
LAMA1P25391 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LAMA1P25391 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LAMA1P25391 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LAMA1P25391 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LAMA1P25391 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LAMA1P25391 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LAMA1P25391 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LAMA1P25391 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LAMA1P25391 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LAMA1P25391 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LAMA1P25391 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LAMA1P25391 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC13.85□□□□□ -0.19
LAMA1P25391 AL080243.1-201ENST00000423293 1060 ntBASIC13.85□□□□□ -0.19
LAMA1P25391 AP000244.1-201ENST00000424582 201 ntBASIC13.85□□□□□ -0.19
LAMA1P25391 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.85□□□□□ -0.19
LAMA1P25391 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC13.85□□□□□ -0.19
LAMA1P25391 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
LAMA1P25391 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LAMA1P25391 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
LAMA1P25391 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LAMA1P25391 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LAMA1P25391 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.85□□□□□ -0.19
LAMA1P25391 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LAMA1P25391 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC13.85□□□□□ -0.19
LAMA1P25391 KRT8P18-201ENST00000413425 1445 ntBASIC13.85□□□□□ -0.19
LAMA1P25391 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LAMA1P25391 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
LAMA1P25391 RNLS-203ENST00000437752 525 ntTSL 2 BASIC13.84□□□□□ -0.19
LAMA1P25391 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC13.84□□□□□ -0.19
LAMA1P25391 RN7SL578P-201ENST00000477781 283 ntBASIC13.84□□□□□ -0.19
LAMA1P25391 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC13.84□□□□□ -0.19
LAMA1P25391 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.84□□□□□ -0.19
LAMA1P25391 HNRNPA1P5-201ENST00000558213 966 ntBASIC13.84□□□□□ -0.19
LAMA1P25391 NDUFB10P1-201ENST00000567319 521 ntBASIC13.84□□□□□ -0.19
LAMA1P25391 HNRNPA1P16-201ENST00000575692 955 ntBASIC13.84□□□□□ -0.19
LAMA1P25391 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LAMA1P25391 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.84□□□□□ -0.19
LAMA1P25391 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.84□□□□□ -0.19
LAMA1P25391 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LAMA1P25391 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LAMA1P25391 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LAMA1P25391 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.84□□□□□ -0.19
LAMA1P25391 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LAMA1P25391 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC13.84□□□□□ -0.19
LAMA1P25391 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.84□□□□□ -0.19
LAMA1P25391 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
LAMA1P25391 BATF-202ENST00000555504 361 ntTSL 2 BASIC13.84□□□□□ -0.19
LAMA1P25391 RN7SL556P-201ENST00000582856 298 ntBASIC13.84□□□□□ -0.19
LAMA1P25391 AC113385.2-201ENST00000614465 762 ntBASIC13.84□□□□□ -0.19
LAMA1P25391 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LAMA1P25391 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LAMA1P25391 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.84□□□□□ -0.19
LAMA1P25391 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LAMA1P25391 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LAMA1P25391 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LAMA1P25391 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LAMA1P25391 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.84□□□□□ -0.19
LAMA1P25391 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.84□□□□□ -0.19
LAMA1P25391 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LAMA1P25391 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC13.84□□□□□ -0.19
LAMA1P25391 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LAMA1P25391 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LAMA1P25391 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.84□□□□□ -0.19
LAMA1P25391 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.84□□□□□ -0.19
LAMA1P25391 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LAMA1P25391 RN7SL375P-201ENST00000492442 298 ntBASIC13.84□□□□□ -0.19
LAMA1P25391 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
LAMA1P25391 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.84□□□□□ -0.19
LAMA1P25391 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC13.84□□□□□ -0.19
LAMA1P25391 AC145285.5-201ENST00000562217 361 ntBASIC13.84□□□□□ -0.19
LAMA1P25391 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.84□□□□□ -0.19
LAMA1P25391 AC005746.3-201ENST00000614751 393 ntBASIC13.84□□□□□ -0.19
LAMA1P25391 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC13.84□□□□□ -0.19
LAMA1P25391 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LAMA1P25391 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.84□□□□□ -0.19
LAMA1P25391 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LAMA1P25391 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LAMA1P25391 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
LAMA1P25391 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
LAMA1P25391 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.83□□□□□ -0.19
LAMA1P25391 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
LAMA1P25391 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LAMA1P25391 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
LAMA1P25391 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LAMA1P25391 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
LAMA1P25391 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LAMA1P25391 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC13.83□□□□□ -0.2
LAMA1P25391 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC13.83□□□□□ -0.2
LAMA1P25391 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC13.83□□□□□ -0.2
LAMA1P25391 AC010900.1-201ENST00000449849 1296 ntBASIC13.83□□□□□ -0.2
LAMA1P25391 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
LAMA1P25391 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC13.83□□□□□ -0.2
LAMA1P25391 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC13.83□□□□□ -0.2
LAMA1P25391 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC13.83□□□□□ -0.2
LAMA1P25391 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC13.83□□□□□ -0.2
LAMA1P25391 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LAMA1P25391 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LAMA1P25391 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms