Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 RNA5SP412-201ENST00000516234 123 ntBASIC14.75□□□□□ -0.05
HLA-DPA1P20036 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 AC005586.2-201ENST00000563946 837 ntBASIC14.75□□□□□ -0.05
HLA-DPA1P20036 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 MIR6752-201ENST00000618442 71 ntBASIC14.75□□□□□ -0.05
HLA-DPA1P20036 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 AC064801.2-201ENST00000625052 1303 ntBASIC14.74□□□□□ -0.05
HLA-DPA1P20036 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.74□□□□□ -0.05
HLA-DPA1P20036 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.74□□□□□ -0.05
HLA-DPA1P20036 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 FAM58BP-201ENST00000439056 645 ntBASIC14.74□□□□□ -0.05
HLA-DPA1P20036 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 MIR4741-201ENST00000579822 90 ntBASIC14.74□□□□□ -0.05
HLA-DPA1P20036 AC010328.2-201ENST00000597698 1111 ntBASIC14.74□□□□□ -0.05
HLA-DPA1P20036 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 MIR6720-201ENST00000611664 98 ntBASIC14.74□□□□□ -0.05
HLA-DPA1P20036 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HLA-DPA1P20036 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 AC015818.8-201ENST00000587907 1519 ntBASIC14.73□□□□□ -0.05
HLA-DPA1P20036 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 GRK6P1-201ENST00000400595 1711 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms