Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GCFC2P16383 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
GCFC2P16383 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GCFC2P16383 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.46■□□□□ 0.22
GCFC2P16383 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
GCFC2P16383 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.45■□□□□ 0.22
GCFC2P16383 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.45■□□□□ 0.22
GCFC2P16383 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
GCFC2P16383 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.45■□□□□ 0.22
GCFC2P16383 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.45■□□□□ 0.22
GCFC2P16383 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
GCFC2P16383 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
GCFC2P16383 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
GCFC2P16383 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
GCFC2P16383 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
GCFC2P16383 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.45■□□□□ 0.22
GCFC2P16383 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.45■□□□□ 0.22
GCFC2P16383 NKAIN1P1-201ENST00000435754 582 ntBASIC16.45■□□□□ 0.22
GCFC2P16383 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.45■□□□□ 0.22
GCFC2P16383 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 AC022217.1-201ENST00000521069 738 ntBASIC16.45■□□□□ 0.22
GCFC2P16383 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.45■□□□□ 0.22
GCFC2P16383 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.45■□□□□ 0.22
GCFC2P16383 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 PGAM1P5-201ENST00000548011 764 ntBASIC16.45■□□□□ 0.22
GCFC2P16383 AC009779.1-201ENST00000551138 283 ntBASIC16.45■□□□□ 0.22
GCFC2P16383 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.45■□□□□ 0.22
GCFC2P16383 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.45■□□□□ 0.22
GCFC2P16383 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.45■□□□□ 0.22
GCFC2P16383 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.45■□□□□ 0.22
GCFC2P16383 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.45■□□□□ 0.22
GCFC2P16383 AC243960.2-201ENST00000600996 747 ntBASIC16.45■□□□□ 0.22
GCFC2P16383 MIR6799-201ENST00000620297 69 ntBASIC16.45■□□□□ 0.22
GCFC2P16383 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.45■□□□□ 0.22
GCFC2P16383 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.45■□□□□ 0.22
GCFC2P16383 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
GCFC2P16383 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
GCFC2P16383 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
GCFC2P16383 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.45■□□□□ 0.22
GCFC2P16383 AC018629.1-201ENST00000623381 1736 ntBASIC16.45■□□□□ 0.22
GCFC2P16383 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCFC2P16383 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
GCFC2P16383 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
GCFC2P16383 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.44■□□□□ 0.22
GCFC2P16383 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCFC2P16383 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.44■□□□□ 0.22
GCFC2P16383 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.44■□□□□ 0.22
GCFC2P16383 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC16.44■□□□□ 0.22
GCFC2P16383 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.44■□□□□ 0.22
GCFC2P16383 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCFC2P16383 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCFC2P16383 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCFC2P16383 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCFC2P16383 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
GCFC2P16383 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
GCFC2P16383 OR2R1P-201ENST00000441404 914 ntBASIC16.44■□□□□ 0.22
GCFC2P16383 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.44■□□□□ 0.22
GCFC2P16383 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.44■□□□□ 0.22
GCFC2P16383 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.44■□□□□ 0.22
GCFC2P16383 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.44■□□□□ 0.22
GCFC2P16383 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.44■□□□□ 0.22
GCFC2P16383 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.44■□□□□ 0.22
GCFC2P16383 AL591471.1-201ENST00000621855 229 ntBASIC16.44■□□□□ 0.22
GCFC2P16383 AC090386.2-201ENST00000623010 1039 ntBASIC16.44■□□□□ 0.22
GCFC2P16383 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
GCFC2P16383 HSPA7-201ENST00000445535 1927 ntBASIC16.44■□□□□ 0.22
GCFC2P16383 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.44■□□□□ 0.22
GCFC2P16383 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.44■□□□□ 0.22
GCFC2P16383 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCFC2P16383 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
GCFC2P16383 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCFC2P16383 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC16.44■□□□□ 0.22
GCFC2P16383 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCFC2P16383 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCFC2P16383 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.44■□□□□ 0.22
GCFC2P16383 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCFC2P16383 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms