Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINGO3P0C6S8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINGO3P0C6S8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINGO3P0C6S8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINGO3P0C6S8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.21□□□□□ -0.13
LINGO3P0C6S8 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.21□□□□□ -0.13
LINGO3P0C6S8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.21□□□□□ -0.13
LINGO3P0C6S8 RN7SL204P-201ENST00000582831 262 ntBASIC14.21□□□□□ -0.13
LINGO3P0C6S8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINGO3P0C6S8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.21□□□□□ -0.13
LINGO3P0C6S8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.21□□□□□ -0.13
LINGO3P0C6S8 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINGO3P0C6S8 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LINGO3P0C6S8 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC14.21□□□□□ -0.13
LINGO3P0C6S8 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINGO3P0C6S8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINGO3P0C6S8 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINGO3P0C6S8 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC14.21□□□□□ -0.14
LINGO3P0C6S8 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LINGO3P0C6S8 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINGO3P0C6S8 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINGO3P0C6S8 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINGO3P0C6S8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.21□□□□□ -0.14
LINGO3P0C6S8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.21□□□□□ -0.14
LINGO3P0C6S8 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINGO3P0C6S8 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 AL158212.4-201ENST00000624062 1286 ntBASIC14.2□□□□□ -0.14
LINGO3P0C6S8 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINGO3P0C6S8 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 SPDYE19P-201ENST00000338590 713 ntBASIC14.19□□□□□ -0.14
LINGO3P0C6S8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 AC002472.2-201ENST00000442739 958 ntBASIC14.19□□□□□ -0.14
LINGO3P0C6S8 GNAQP1-201ENST00000444815 1067 ntBASIC14.19□□□□□ -0.14
LINGO3P0C6S8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 AC023310.3-201ENST00000557027 670 ntBASIC14.19□□□□□ -0.14
LINGO3P0C6S8 AC100756.1-201ENST00000562736 682 ntBASIC14.19□□□□□ -0.14
LINGO3P0C6S8 AC138749.3-201ENST00000567691 622 ntBASIC14.19□□□□□ -0.14
LINGO3P0C6S8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
LINGO3P0C6S8 MIR4745-201ENST00000577608 62 ntBASIC14.19□□□□□ -0.14
LINGO3P0C6S8 LINC02560-201ENST00000596379 459 ntBASIC14.19□□□□□ -0.14
LINGO3P0C6S8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms