Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 Z98257.2-202ENST00000641138 1548 ntBASIC12.3□□□□□ -0.44
CD74P04233 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CD74P04233 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.3□□□□□ -0.44
CD74P04233 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CD74P04233 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.3□□□□□ -0.44
CD74P04233 DMBT1P1-203ENST00000636837 4628 ntBASIC12.3□□□□□ -0.44
CD74P04233 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.29□□□□□ -0.44
CD74P04233 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
CD74P04233 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.29□□□□□ -0.44
CD74P04233 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.29□□□□□ -0.44
CD74P04233 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.29□□□□□ -0.44
CD74P04233 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.29□□□□□ -0.44
CD74P04233 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 RNU1-114P-201ENST00000365297 166 ntBASIC12.29□□□□□ -0.44
CD74P04233 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.29□□□□□ -0.44
CD74P04233 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.29□□□□□ -0.44
CD74P04233 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
CD74P04233 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.29□□□□□ -0.44
CD74P04233 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.29□□□□□ -0.44
CD74P04233 AK2P2-201ENST00000439142 405 ntBASIC12.29□□□□□ -0.44
CD74P04233 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.29□□□□□ -0.44
CD74P04233 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.29□□□□□ -0.44
CD74P04233 VDAC1P7-201ENST00000462417 847 ntBASIC12.29□□□□□ -0.44
CD74P04233 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CD74P04233 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.29□□□□□ -0.44
CD74P04233 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.29□□□□□ -0.44
CD74P04233 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.29□□□□□ -0.44
CD74P04233 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.29□□□□□ -0.44
CD74P04233 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.29□□□□□ -0.44
CD74P04233 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 AC036164.1-201ENST00000570544 333 ntBASIC12.29□□□□□ -0.44
CD74P04233 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.29□□□□□ -0.44
CD74P04233 AC104506.1-201ENST00000609247 429 ntBASIC12.29□□□□□ -0.44
CD74P04233 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.29□□□□□ -0.44
CD74P04233 AC073592.8-201ENST00000624126 511 ntBASIC12.29□□□□□ -0.44
CD74P04233 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CD74P04233 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
CD74P04233 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CD74P04233 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.29□□□□□ -0.44
CD74P04233 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
CD74P04233 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.29□□□□□ -0.44
CD74P04233 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.29□□□□□ -0.44
CD74P04233 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD74P04233 AL928654.5-201ENST00000624831 2501 ntBASIC12.29□□□□□ -0.44
CD74P04233 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CD74P04233 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.28□□□□□ -0.44
CD74P04233 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.28□□□□□ -0.44
CD74P04233 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.28□□□□□ -0.44
CD74P04233 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CD74P04233 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CD74P04233 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CD74P04233 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms